Streptococcus rubneri: LPB404_05250
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Entry
LPB404_05250 CDS
T09579
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
srun
Streptococcus rubneri
Pathway
srun03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LPB404_05250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srun03400
]
LPB404_05250
Enzymes [BR:
srun01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LPB404_05250
DNA repair and recombination proteins [BR:
srun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LPB404_05250
Prokaryotic type
LPB404_05250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QXW95847
LinkDB
All DBs
Position
1034687..1035340
Genome browser
AA seq
217 aa
AA seq
DB search
MQHSPWHEAIKSHLPEGYFHQINDFMNEVYSQGVVYPPRDKVFKALQTTEMDQVKVLILG
QDPYHGPDQAQGLSFSVPDYVPAPPSLQNILKELRSDIGEKRSHDLTTWAEQGVLLLNAC
LTVPAGQANGHAGKIWEPFTDAVIKVVNELEEPVVFILWGSYARKKKPLITHDRHLVLES
AHPSPLSAYRGFFGSQPFSKTNQFLEDAGREPIDWLR
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgcaacattccccctggcacgaagccatcaaatcccatcttccggaagggtattttcat
cagatcaatgactttatgaatgaggtctatagccaaggagtggtctatccaccgcgtgat
aaggtctttaaggccttgcagacaacggagatggatcaggtcaaggtcttgatcttaggc
caagatccctaccatggaccggatcaagcacaaggcttaagtttttctgtcccagattat
gtaccagcaccgccttctttgcaaaatattcttaaagaattgcgctcagacattggtgag
aagcggtcgcatgatctgactacttgggctgaacaaggggtgctcttgctcaatgcctgc
ttgacggtgcctgctgggcaggccaatggccatgctggaaaaatttgggagccgtttaca
gatgctgtgatcaaggtggtcaatgagttggaggagccagtcgtctttatcctctgggga
tcttacgctcgtaagaaaaagcctctgattacccacgatcgacatttggtccttgaatca
gctcatccaagtcccttatcggcctaccgaggattctttggttcccagcccttttcaaaa
accaatcaatttttggaagatgcaggacgcgagccgattgattggttaagatag
DBGET
integrated database retrieval system
