Streptomyces reticuli: TUE45_03694
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Entry
TUE45_03694 CDS
T04246
Symbol
sigF_5
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
srw
Streptomyces reticuli
Brite
KEGG Orthology (KO) [BR:
srw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srw03021
]
TUE45_03694 (sigF_5)
Transcription machinery [BR:
srw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TUE45_03694 (sigF_5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
GerE
HTH_Crp_2
MarR_2
HTH_3
MarR
DUF134
HTH_5
Motif
Other DBs
NCBI-ProteinID:
CUW28961
LinkDB
All DBs
Position
I:4274034..4274864
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AA seq
276 aa
AA seq
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MSASTAPPQEEAPTPTPPAPEKRRGADTRALTQVLFAELKQLTPGTPEHNRVRGALIEAN
LPLVRYAAARFRSRNEPMEDVVQVGTIGLINAIDRFDPDRGVQFPTFAMPTVVGEIKRYF
RDNVRTVHVPRRLHELWVQVNSATEDLTTLYGRSPSTAEIADRLRISEDEVLSCIEAGRS
YHATSLEAAQEGDGLPGLLDRIGYEDPALDGVEHRDLVRHLLVQLPEREQRILLLRYYSN
LTQSQISAELGVSQMHVSRLLARSFQRLRSANRIDA
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggccagtactgcgccgccccaggaagaggcgcccactccgaccccaccggccccc
gagaagcgccgcggcgccgacacccgggccctgacccaggtgctgttcgccgagctgaag
cagctgacccccggtacgccggagcacaaccgggtgcggggggcgctgatcgaggcgaac
ctcccgctcgtgcgctacgccgccgcccgcttccgctcccgcaacgagcccatggaggac
gtcgtccaggtcggcaccatcggcctgatcaacgccatcgaccgcttcgacccggaccgg
ggcgtgcagttcccgaccttcgcgatgcccaccgtggtcggcgagatcaaacggtacttc
cgggacaacgtccgcaccgtccacgtcccgcgccggctgcacgagctgtgggtgcaggtg
aacagcgccaccgaggacctgaccacgctctacggccgctcgccgtccaccgccgagatc
gccgaccggctccggatcagcgaggacgaggtgctcagctgcatcgaggcggggcgctcg
taccacgccacctcgctggaggccgcccaggagggcgacggactgcccggcctgctggac
cggatcggctacgaggacccggccctggacggcgtggagcaccgcgacctggtccgccac
ctcctcgtccaactcccggagagagaacagcgaatccttcttctgcgctactacagcaat
ctcacccagtcacagatcagcgcggaactcggcgtctcccagatgcacgtctcccgccta
ctcgcccgtagcttccaacggctgcgctccgcaaatcggatcgacgcatag
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