Sinocyclocheilus rhinocerous: 107707593
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Entry
107707593 CDS
T04916
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E-like
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04010
MAPK signaling pathway
srx04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107707593
04020 Calcium signaling pathway
107707593
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
srx04040
]
107707593
Ion channels [BR:
srx04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107707593
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
107707593
NCBI-ProteinID:
XP_016367156
LinkDB
All DBs
Position
Unknown
AA seq
1183 aa
AA seq
DB search
MELTSITGNSKDVEASKTEKEEETPDAPKAPPPVSMFIFKPNNLVRRACHYIVNLRYFEM
SILLVIAASSIALAAEDPVNTNSDRNKVLRYFDYVFTGVFTFEMIIKMIEQGLILHDGSY
FRDLWNILDFIVVVGALVAFALTNVMGSNTGRDIKTIKSLRVLRVLRPLKTIKRLPKLKA
VFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFYYCTDSSKDTEDECKGYYIDYD
KDKKKEKREWKRRDFHYDNIIWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGPSQGNRME
MSIFYIIYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFAISAKPLTR
YMPQNRQTLQFRLWHFVVSPVFEYTILTMIALNTIVLMMKHHDPIDGYDNVLKYLNTVFT
VIFTVECVLKILAFGIMNYFRDTWNIFDFITVLGSITEIVVDKVHTAKSFNMGFLKLFRA
ARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLNPKSHI
NEHNNFKTFFGALMLLFRSATGESWQEIMLSCLGEKECEKDESLNNSTTNEKKDCGTEFA
YFYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRIWGEYDRAACGKL
HYKEMYKVVRTISPPLGFGKNCPYRVACKRLVLMNMPVDEDMSVHFTSTLMALIRTALDI
KIARGGEDRGQMDIELQKEISVIWPHLSQKSLDLLVPIHKASDMTIGKIYAAMMIMDYYK
QNKAKKLRQQLEEQKHAPMFQRMDASSLPQDILCSAKALPFLSHSAGSALSRGGFVALSP
ISPQDLFMQPLAQDSMEERDEYQHQYHLQSMVPEHKEFSSPLCPTSMQVDPLQVPGRGVS
IRASSMPRLAIEPQVSSESKLMKRSFSTIGDQCVNGDWQEEFSLERVSPDRLERPRQRSF
RAVRSSLREPVDKERGRSKERRHLLSPDVSRCNSEERSQSQERRHSRSPSEGRKHTTLRQ
GNSSGSPVPSTSDSGTPRGRRQLPQTPSRPRPHISYSPLVCRAQPTQGEVRARAQSAEEG
EEPTGTRPGTAMAHSTPHRYISEPYLPLQEDVNSPNSSGVKETLTFEAAMATSLGRSNTI
SSAPQLRHTWQVPNGHFRKRLAQATSGTSGCELLSDTDEDDRC
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggagctgacctccattacgggtaatagtaaagacgtggaggcctcaaagacagaaaaa
gaagaggaaaccccagatgcaccaaaagcccctcctcctgtcagcatgttcatcttcaaa
cccaacaacctggtccgcagggcctgccactatattgtcaatcttcgttatttcgagatg
tcaatccttcttgtgatcgccgccagcagtatcgccttggctgctgaagaccctgtcaac
actaattcagacaggaacaaagtgctgcgctattttgattatgtattcactggtgtcttc
acatttgaaatgataatcaagatgattgagcagggattgatcttacatgatggctcctat
ttccgtgacctgtggaacattctggacttcatagttgtggtgggagctctggtggccttt
gctctcacgaatgtgatggggagtaacactggaagagacattaaaaccatcaaatcactg
cgtgttctcagagtattgaggccacttaagactattaaaagacttcccaaactcaaggcc
gtgtttgactgtgtggtcacatcgctaaaaaatgtcttcaacatcctcatcgtctacaag
ctctttatgttcatatttgcagtcattgcagtgcagcttttcaaagggaaattttactac
tgtaccgacagttccaaggacacagaagacgagtgcaagggttactacattgactatgac
aaagacaagaaaaaggagaaacgagagtggaagagacgtgattttcattatgataacatc
atctgggctctgttgactctcttcactgtatccactggggaagggtggccgcaagttttg
cagcactctgtggatgtgaccgaggaggaccggggtcccagtcagggaaacagaatggag
atgtccatcttttacatcatttattttgtggtgtttcccttcttcttcgtcaacatattt
gtggccctcatcatcatcaccttccaagagcagggtgacaaaatgatggaggagtgcagt
ctggagaaaaacgagagggcttgtatcgactttgccatcagtgccaaacctttgactcgc
tacatgccccagaacagacagaccttacagttccggctgtggcactttgtggtgtctcct
gtatttgaatacaccatactgacgatgatcgcccttaacaccatcgttctcatgatgaag
catcatgaccctattgacggctatgacaatgtactaaaatacctcaacactgttttcact
gttattttcactgtggaatgtgttctcaagatcctggcatttggtattatgaattatttc
agagacacatggaatatatttgacttcatcacagttctaggaagcatcactgaaattgtg
gttgacaaagtccacacagcaaaaagttttaatatgggcttcctgaagttattccgggca
gctcggctgattaaacttctgcgtcagggctacaccatccgtattctgctttggactttt
gtccagtctttcaaggctctaccatatgtctgtctgctaatcgccatgctgtttttcatc
tatgccatcattggcatgcaggtattcggcaacatcaagctaaatccaaaaagccatatc
aacgaacacaataactttaagacattttttggtgcactcatgctgttgtttaggagtgca
acaggtgagtcatggcaggaaatcatgttatcgtgtttaggagagaaggaatgtgaaaaa
gatgagtctctcaacaactcaacaacaaatgagaaaaaagattgtggtaccgagtttgca
tacttctactttgtctccttcatcttcttcagttcttttctgatgctaaatctgtttgtg
gccgtgattatggataattttgagtacctgacacgtgactcgtccattctgggtcctcac
cacttggatgagtttgtacggatctggggagagtatgaccgtgcagcatgtggaaaacta
cactataaggagatgtacaaagtagtacgcacaatatcacctccactgggctttggaaag
aattgtccctacagggtggcatgcaagcggttggttctgatgaacatgccagtggatgaa
gacatgtccgtccacttcacctccactcttatggccctgatacgcaccgcgctggacatt
aaaatcgctcgagggggtgaggacaggggtcagatggacatagaattgcagaaggaaatc
agtgtcatctggccacacctctcccagaaatctcttgatctgcttgtacccatccacaaa
gccagtgacatgaccattgggaagatttatgcagccatgatgatcatggactactacaag
cagaacaaagctaagaagctccggcaacagcttgaggaacagaaacatgcaccgatgttc
caacgcatggatgcatcttcactgccacaggacattctctgcagtgccaaagctctgcca
ttcctgtcccacagtgcaggatctgccctgagtagaggtgggtttgtggcactgagtccc
atctcccctcaagatctcttcatgcagcccttggcccaagacagcatggaagagagggat
gaataccaacaccagtatcaccttcagagtatggtgcccgagcacaaagaatttagcagt
ccgctgtgccccactagcatgcaggtcgatcctctgcaagtgccagggagaggcgtctct
atccgagcctcttccatgcctcgcctggcgatagagccacaggtatcttcagagagcaaa
ctgatgaagcgctcgttctccacgatcggtgatcagtgtgtgaatggtgactggcaggaa
gagttctcgctggagagggtgagcccagacagactggaaagacccaggcaaagaagcttc
agagctgtcaggtcaagcctgcgggagccagtggacaaagagagaggacggtctaaagag
cgaagacacctgctgtctccagatgtgtctcgctgcaactcagaggaaaggagtcagtcc
caggagagacgccactctcgatcgcccagtgagggcaggaagcacacgaccctcagacag
ggaaatagttcaggcagcccagttccttccacttctgattcagggacgccacgagggcgc
cgtcaactcccacagacaccttctcggcctcggccccacatctcctactctccattagtg
tgccgtgctcaacccacacaaggggaggttcgggcacgggcccagtccgcagaggaaggg
gaggaaccaaccgggacgaggccaggcaccgccatggcccactccacccctcaccgctac
atctcggagccatacctgccactgcaggaggacgttaatagtccgaactcaagtggtgta
aaggagactctcacttttgaggctgccatggcaaccagcctgggacgctccaacaccatc
agctccgctccacaactgcgtcacacctggcaggtgcctaacggacatttccgtaaacga
ctagcacaagccacgtcggggacgtcaggctgcgagcttctcagtgacactgatgaggat
gaccggtgttag
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