Sinocyclocheilus rhinocerous: 107707845
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Entry
107707845 CDS
T04916
Symbol
lig4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
107707845 (lig4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srx03400
]
107707845 (lig4)
Enzymes [BR:
srx01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
107707845 (lig4)
DNA repair and recombination proteins [BR:
srx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
107707845 (lig4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_IV
BRCT_2
BRCT
DNA_ligase_A_C
RNA_ligase
RTT107_BRCT_5
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
107707845
NCBI-ProteinID:
XP_016367431
UniProt:
A0A673GZV5
LinkDB
All DBs
Position
Unknown
AA seq
910 aa
AA seq
DB search
MMEGASKSDATPQTAVAAQVPFIDLCTVLENIQKTKLRPDKGKILKDFIDSWRNFHAALH
KDNSNTTDSFYAAMRLIVPQFERERMAYGIKENMLAKLYIEVLGLPKNGPDANKLLNYRT
PTTSQGEAGDFALMAYFVLKKRCTSQGNLSIKEVNDFLDSVAINNASKQKDQVKKSLLHL
ITQSSALEQKWLIRMILKDMKLGISKETVLQVFHPDAPELYNVTTDLNKVCRQLHDPSVS
LSEVSIDLFSAFKPMLAAVANIRLIEKQMGNRTFYIETKFDGERIQLHKAGDVYKYYTRN
SYEYTQQFGASPLEGSLTPYIHNVFKPHVVNCILDGEMMAYNPTTETFMQKGSKFDIKRL
MDDSDLQTCFCVFDVLLVNNQKFANEPLKKRYEILETVLTPIKGRIQLVTKSEGKTMQEV
VNSLNEAIDNLEEGIMVKDPMSIYKPDKRGEGWVKIKPEYVDGLMDELDLLIVGGYWGKG
RRSGMLSHFLCAVAEVPSPGEKPTVFHTLCRIGSGYTMKELYDLGLKLAKHWKVYNRNNP
PAAILCGTEKPEVYIEPRNSVIIQVKAAEIVSSEMYKTNCTLRFPRIERIREDKEWYQCM
TLAELSQFRSRASGKLASRHLHIQEDQPEKKKHKFVAKPKKTIGVIDHFKSQDLSAVTKE
TDMFEDVEFCVINGNDEHSKAELEKVVARCGGIVVQNPGKDTYCVIAAAHNMRVKNLISS
DQHDVVWATWLLECLENKQVIPWQPRHMIHMSPSTRDHFAKEYDQYGDSYYVDTDEQQLR
EVFERIGPTEAECSSVAQIEAENAWDDLPTSIFRPCTAYFDRCADLGDPKTIIRGTSLDT
RALEFRFHGGTVVEKLKEGISHVIVESERRTLDLKTLRRLYAKKFKIVRESWVTDSIKAG
HVEDETAYLI
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaggtgcctcaaaaagtgatgccacaccacagacggctgttgctgcacaagtt
ccgttcatcgacctctgcacagttctggagaacatccaaaagaccaaactccgaccagac
aaaggcaaaattctaaaggattttattgattcttggaggaacttccatgcagcacttcac
aaggacaattccaataccacagattcattttacgcagccatgcgtcttattgtgcctcaa
tttgaacgagagcgaatggcttacggtataaaagaaaacatgcttgccaaactatatatt
gaagttttaggcctgcctaaaaatggacctgacgcaaacaaactcctaaattatagaact
ccaaccacaagtcaaggagaagcaggtgactttgcccttatggcctacttcgtcctgaaa
aaaaggtgtacaagtcaggggaatttaagcattaaagaagtcaatgacttcttggattcc
gtagctatcaacaatgccagcaaacagaaggatcaagtgaagaaaagccttttgcatctg
ataacccagagttcagctttggaacagaagtggctcattagaatgatcctcaaggacatg
aaacttggcattagcaaggagacagtacttcaggttttccatccagatgcaccagaactc
tacaatgtcaccacagatctgaataaagtctgccgacagcttcatgatccatctgtgtcc
ctcagtgaggtctccatcgatctgttttctgcttttaaaccaatgctggctgctgttgcc
aacatcagactgatagagaagcaaatgggcaaccggacattctatattgagacaaagttt
gatggtgagcgcattcagctgcacaaagctggagatgtttacaaatactataccaggaac
tcttatgagtacacgcaacagtttggggcctctccactagagggctccctcacaccatac
attcacaacgtcttcaaacctcatgtggtaaactgcatattggatggagagatgatggct
tataaccctacaactgagaccttcatgcagaagggcagtaagtttgatattaaaaggctg
atggatgactctgatttgcaaacctgcttttgcgtatttgatgtcttgttagtaaacaat
cagaagtttgcaaatgagcctctcaagaagcgctacgaaattcttgagactgtcttaaca
ccgatcaaaggtcgtatccagttggtcacaaaatctgaaggcaaaaccatgcaagaagtg
gtgaattctctcaatgaggccattgacaatctggaagaggggattatggttaaggatccc
atgtccatctacaaaccagataaacggggcgaaggatgggtgaaaattaagcctgaatat
gtagatggtctgatggatgagcttgatctgctgatagtgggaggctactggggtaaaggc
aggagaagcgggatgctctctcattttctgtgtgcggtagcagaggtgccgagtccaggg
gagaagcccacagtgttccacaccctctgccgcattggatcaggctacactatgaaagaa
ctgtacgatcttggtctgaagttggccaaacattggaaagtttacaacagaaataatcct
ccagctgccatcttgtgtggaacagaaaaaccagaggtttacatagaaccacgcaactca
gtgatcatacaagtcaaagcggcagagatcgtctctagtgaaatgtataagaccaactgc
acattacgcttcccaagaatagaaagaatcagagaagacaaagagtggtatcagtgcatg
accttggctgaactgagccagttccgctccagagcttctggaaagctggcatccagacat
ctacatatccaagaggaccagcctgaaaagaagaagcacaagttcgtagccaagcccaag
aagacaatcggagtcattgaccactttaaatctcaggatttatcagcggtcaccaaagag
acggatatgtttgaagatgtggagttttgtgtgataaatggcaatgatgaacattccaag
gcagagcttgagaaagttgtggcccgctgtggaggcattgttgtgcagaaccctgggaaa
gacacatactgtgtgattgcagctgcgcacaacatgagagtaaagaacctcatctcctca
gaccaacatgatgtggtgtgggctacttggctgctggagtgtctggaaaataagcaggtt
ataccctggcaaccacgtcacatgatccacatgtcaccttccaccagggaccactttgct
aaagagtatgatcagtatggagacagttattatgttgacactgatgaacaacagctgagg
gaagtctttgaaaggattggccccacagaagctgagtgttcgtctgtggcacagatagaa
gcagagaatgcctgggatgacttgcccactagcatttttaggccttgcactgcatacttt
gaccggtgtgctgaccttggagatccaaaaaccatcatacggggtacaagtttggacacg
cgtgccttagaattccgattccatggtggtactgttgtggagaaactgaaggaaggaatc
tcgcatgtcatagtagaaagtgaaagaagaactctggacttgaagacgttgaggcgactt
tatgctaagaagttcaaaattgttcgagaatcttgggtgaccgattctatcaaagcaggc
catgtagaggatgagactgcctacttaatataa
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