Sinocyclocheilus rhinocerous: 107708224
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Entry
107708224 CDS
T04916
Name
(RefSeq) DNA-binding protein SMUBP-2-like isoform X1
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
srx03009
]
107708224
03012 Translation factors [BR:
srx03012
]
107708224
Enzymes [BR:
srx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
107708224
5.6.2.5 RNA 5'-3' helicase
107708224
Ribosome biogenesis [BR:
srx03009
]
Eukaryotic type
Other ribosome biogenesis factors
107708224
Translation factors [BR:
srx03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
107708224
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_19
AAA_30
Viral_helicase1
zf-AN1
ResIII
DEAD
NAT10_TcmA_helicase
AAA_22
UvrD-helicase
Flavi_DEAD
AAA_16
nSTAND3
SLFN-g3_helicase
PhoH
T2SSE
nSTAND_NTPase5
Herpes_ori_bp
SRP54
AAA
NPHP3_N
AAA_33
IstB_IS21
AAA_25
UvrD_C_2
Zot
AAA_7
ABC_tran
ATPase
cobW
AAA_5
Glyco_transf_21
RL
Motif
Other DBs
NCBI-GeneID:
107708224
NCBI-ProteinID:
XP_016367883
UniProt:
A0A673N7H0
LinkDB
All DBs
Position
Unknown
AA seq
996 aa
AA seq
DB search
MEVENFVSKTLELLQEEREAELEETRAWQENLSPKNLQHKGVYLLKLQIASQHTGMYGRL
LVVFEPRKSIGPSILPSNTFGPGDIIGLYQAEGQDQPSQLGSGVVTRVTQASLTVAFDNT
QDGMNLDRDGLYNLMKLANDVTYRRLSSALKSLNGYSSGPASHLISVLFGYSEPGILSHQ
HPLEFSNTGLDNSQKEAVSFAISQKDVAIIHGPPGTGKTTTVVEVILQAVKQEQKVLCCA
PSNVAVDNLVERLAKSKVKVLRLGHPARLLESIQKHSLDAVLAHSDNTNIISDIRKDMDK
AFNEMKKARDKGQRSNLRLEIRELRRELRTREEMAITQILKRADVILATNTGASDDGPLK
HLPNDHFDLVVIDECAQALESSCWIALLKARKCILAGDYKQLPPTIKSQSAASKGLSVSL
MERLIKKYGDPVVRMLTTQYRMNGAIMQWASEQMYEGKLIAHPSVEKHLLKDLAGVADVE
ETRIPLLLIDTAGCGLNEMEDTDEQSKGNQGEVDILALHIKALTDAGVQVKDIAIIAPYN
LQVDLLRQKLSHKYAELEIKSVDGFQGREKEAVVLSLVRSNRKGEVGFLAEDRRINVAVT
RARRQLVVVCDSQTVRKHDFLKSLVDYMSEHGEVRTAFEYLEDCVAQNYIRDEKDKQTNS
KDAASAKQKPKNQGMKTEKEQKKSADNKSRGVNQSNVQPEQHKNTNSHHPKPKDADQRKE
IKEQLLNFLKDSRKTELQFPSTLNSHERLLVHELSEEMGLRHESQGEGKNRRITVSRPPS
GLEKSVEPEQPDVIACTAAKLQEELQKGPSQPAVDLKSLHLERMRREQEKREEKKQQKQQ
SVRREPDPNTSKSQSVKKPKGTSKGNTKIKAGATDIAAAAMPDDDFDGLINAVVKADSVC
GFVKCKASVLTLGQFCLYCNRQYCLSHHIPEVHGCGDKAKAQARMRISKEGVLYAGSGQK
GKSVDPNKKAYLQRKLDSKLKDMASQRKTKAKDKEN
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atggaggttgaaaacttcgtttccaagactcttgagctcctgcaagaagagagagaagct
gaattggaagaaacacgagcatggcaggagaatttatctcccaagaatttacagcacaaa
ggagtgtacctgctgaaacttcagatcgcaagccagcatactggcatgtatggcagactt
ctggtagtttttgaacccaggaaaagtataggaccctcaattctgcccagcaacaccttc
ggacctggtgatattataggtttgtatcaggcagagggtcaggatcagccatctcagctg
ggttcaggtgtggtgacacgtgttactcaagcatcactgacggtggcttttgataacacg
caagacggtatgaacttggacagagatggactttacaatctaatgaagctggcaaatgat
gtgacctacaggagactgtcaagtgccttaaagtctttaaatggatacagcagtggtcct
gcgtctcacctgatcagtgtcctctttggttactcagaaccagggatattatcacatcag
cacccactggaatttagcaacactgggttagataattctcagaaagaggctgtgtccttt
gcaatatctcagaaagatgttgcaatcatacatggaccaccaggaactggcaaaaccact
acagtggttgaagtaatcctgcaggcagtaaaacaggaacaaaaggtcctttgctgtgct
ccttccaatgtggctgttgataacttggtggagcgcctggcaaagagcaaggtcaaggtt
ttaagactgggtcacccagcccgcctgcttgagtcgattcagaagcactcgctggatgcg
gtccttgcacacagtgacaacaccaacatcatttctgatattcgcaaggacatggacaaa
gcttttaatgaaatgaagaaggctcgagacaaaggccaacggagcaatctgagactggaa
atcagggaactgcggcgagagctgaggaccagggaggaaatggctatcactcagatcctg
aaaagggccgatgttattctagcaactaacactggagcctctgatgatggtcctctcaaa
catcttcctaatgatcattttgacctggtggtgatagatgagtgtgctcaggctctagag
agcagctgttggatcgctctgctcaaagcacgcaagtgcatactggctggggattacaaa
cagctgccacccacgatcaaatcacagagtgctgcatctaaaggcctgtctgtcagctta
atggagaggctgataaagaaatatggagacccagtggttcgaatgttgaccactcagtac
cgtatgaacggtgccatcatgcagtgggcttcagagcaaatgtatgagggcaaactgatt
gcacacccttcagtggagaaacacttgcttaaagacctggctggtgttgctgatgttgag
gaaaccagaattcccctcctgctcattgacactgcaggctgtggcctgaatgagatggag
gatacagacgagcagtccaaaggaaatcaaggagaggtagacattttggctcttcatata
aaggcacttaccgacgctggagttcaagtcaaagacattgcgattattgcaccctataat
ctccaggtggatcttttgagacagaaactgtcccataaatatgcagagctggagatcaag
tctgttgatggcttccagggcagagaaaaggaggcagtggtgttgtcattggtcagatcc
aacaggaagggtgaggttggatttctcgctgaagacagaaggatcaatgtggctgtgact
cgtgccagacgccagcttgtggtagtgtgtgattctcagactgttcgaaaacatgacttc
ctcaaatccctagtggactatatgtctgaacatggagaggttcgtactgcctttgagtac
ctggaagactgtgtggcacagaattacatccgtgatgaaaaggacaaacaaaccaacagc
aaagatgctgcatctgcaaaacagaagcccaagaaccaaggcatgaaaacagaaaaagaa
cagaagaaaagtgcagacaacaaaagtagaggagtgaatcagtccaatgttcagcctgag
caacataaaaataccaattcacaccatcctaaacccaaagatgctgatcagagaaaagag
ataaaggagcaacttctgaactttctgaaagactcaagaaagacagagctacagtttcct
tccacgctaaattctcacgagcgtctgctagtccacgagctctctgaagaaatgggactg
aggcatgaaagccagggagaagggaaaaaccgtcgcatcactgtgtcccgacctccatca
ggactagaaaagtcagtggagcccgaacaaccagacgtgattgcatgtacagcagcgaag
ctacaagaagagttgcaaaaaggaccctcacagccagctgttgatctgaagagcctacat
ttggagcgaatgcgccgggagcaggagaaacgagaggagaaaaagcagcaaaaacaacag
agtgtgagacgggaaccggatcctaatactagtaaaagccaatctgttaagaaacccaaa
ggaacttccaaaggaaacactaagataaaagcaggagccacagatatagctgcagctgcc
atgccagatgacgattttgacggtctcatcaatgctgtggttaaagccgacagcgtttgt
ggtttcgtgaagtgcaaagccagtgtcctgacacttgggcagttctgcctctactgtaac
agacaatactgtctgagtcaccatatacctgaggtgcacggatgtggagacaaagcaaaa
gcacaagctagaatgaggataagtaaagaaggggtgctttacgcaggaagtggccagaag
ggcaaatcggtggatccaaataaaaaagcatatctgcagagaaaactagactctaaactc
aaagatatggcatctcaaagaaaaactaaagccaaagacaaagagaactga
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