Sinocyclocheilus rhinocerous: 107714865
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Entry
107714865 CDS
T04916
Name
(RefSeq) nucleoporin NDC1-like isoform X1
KO
K14315
nucleoporin NDC1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107714865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107714865
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107714865
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Curto_V3
Motif
Other DBs
NCBI-GeneID:
107714865
NCBI-ProteinID:
XP_016376341
LinkDB
All DBs
Position
Unknown
AA seq
543 aa
AA seq
DB search
MFSLKQNCWFIRKVVIWRAVASIAWSVLLLPVTTAVFVLLSRFSLFHPIQWISECTSLLT
ASSTIFTLVVLCGVVLITGLFNLEFYTLVPSIPCSRMALLGTVLHPRQCVHSLVYCTMGM
LVMWCASVTIGGRYSTLGIPCRQSESGEVVTCLNEYHLFLLLAGAFMGYSHSFLGVVQNM
YYVSFQPIQQYKYPRFKGCLPMVVKCSVIQSLYSARNFAALYFFFGYAPKTWISSTLHLQ
IDSSLQPLDSLTGLLDFSLLYHLTISGTFLYFTWYLTVLLFRIYVTEAYSFPVQSTFTED
AVQCLPKVLAETNTLVMKFFALQDLALLSQHSPSRRLEVFSLSQPGGHPHNWNAISRECL
SLLSELTQRLVAHQDAVASNGRVKSQSASSDTRSASSSSSVMSGTEDIAETPRFGVPLRT
PGSVFKSSVGGVHSALTAPFTPDVDSPFSSPAIRRLVGQQEPRSPWFGTVQSPHIMRRGP
KLWSASTESQSNGSPPASPATVPSPPAASEKPSFLAQWLQNRREQVASSSNHTWPVNESF
IIS
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgctgaaacagaattgttggtttataagaaaggttgtgatatggagggcggtg
gcgagcattgcatggtcagtgcttctcttgcccgtgacaactgcagtctttgtgctcttg
agtagattcagcttgtttcaccccatccagtggatttcagaatgcacaagtcttctgacg
gcctcaagcaccatctttacccttgtggtgctgtgtggggtggttctgatcactggcctt
ttcaacctggagttttacactttggttccctccattccatgttcacgcatggctctcctg
ggtacggtgcttcacccacggcaatgtgtccattctttggtctactgcaccatgggcatg
ctggtaatgtggtgtgcttctgttaccatcgggggacgttacagcactctgggaattccc
tgcaggcaaagtgagagtggtgaagtagtgacctgtctgaatgagtatcatctctttctt
ctcttggctggggccttcatgggatacagtcatagtttcttgggagtggttcaaaatatg
tactatgtgtcctttcaacccatacaacaatacaaatatccgcggttcaagggctgtctg
ccaatggtggtcaagtgcagtgttattcagtccttatattcagccaggaattttgctgct
ctctatttcttttttgggtatgctcctaaaacctggatctccagcacacttcatctacag
atagacagttctctccaaccactggattcactgactggacttctagatttctccctcctt
taccacctgacgatcagtggcactttcctgtatttcacctggtatctcactgtgcttctc
ttcaggatttatgtcacagaggcctacagttttccggtgcagtccacatttactgaggat
gcagtgcaatgtcttcccaaagttttggctgagacgaacactttagtcatgaagtttttc
gctctacaagacctcgctctgttatcacaacattctccctcacgcagactagaagtcttc
agtctgagtcagccaggtggtcaccctcataactggaatgccatcagtagggaatgtctg
tctttgctgagtgagctgacgcagagactggtggctcatcaggatgcggttgcctctaat
ggccgagtcaagtctcagtctgccagcagtgacaccagatcagcttcttcaagcagctca
gtgatgtcaggaacagaggacattgctgagacccctcgattcggtgtcccactaaggacc
cctggttcagtcttcaagtcgtcggtggggggtgtgcacagcgctttgacggctcctttc
accccagatgtggacagccctttctcttcccctgctattcgacgtctggttggccaacag
gaaccccggtctccctggtttggtacagtacaaagcccccatatcatgaggagagggccc
aaactgtggagtgcctccacagagtcacaatccaatggcagtcctcctgcctcccctgcc
actgttcctagtcctcctgcagccagtgagaaacccagcttcctcgcccagtggctgcag
aacaggagagagcaggtagcatcttcatctaatcacacctggcccgtaaatgaatccttt
attatttcatag
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