Sinocyclocheilus rhinocerous: 107717637
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Entry
107717637 CDS
T04916
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
107717637
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
srx04040
]
107717637
Ion channels [BR:
srx04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
107717637
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
DUF2264
Motif
Other DBs
NCBI-GeneID:
107717637
NCBI-ProteinID:
XP_016379935
LinkDB
All DBs
Position
Unknown
AA seq
1195 aa
AA seq
DB search
MFSWVIKVVPQPPASPGKLAEEDQTNASTAAPDVTKKEEVKQETSKPTEEVSEENSSQSR
VLSWLSHGFSSALPQPVNSSKLANSEVKHEENAVSSSNTSDQAGMIGWIVQGLGKVVPQP
DEKYKGHTEPEEVTELAVPVVKVDPPVQEVKAVRDAEPLPHIPVVEVVSDEDPDTANVPF
SPRVIEWIKHGFEKVVPHSPVHLHPPAATEAPAQKAASAPVTPCKQEPAPAPAPTPAPAP
PPPPAPAPAPAPPPAPSSAPAAPEQPKVAEDSKGTNVVGWIVQGFGRIIPQPVLKPKEDS
CDVVQNVCILQDPCDMVLEEVDSDWEAQQREQGSGQDVQAEEQVPQEGSSLLQVLPNILP
HMLAMQEQEDAETQTERWMPLIESIKKEAEEIAIANIEERLQQECVEAARIAEDLARQAA
ELAVRQLEEEQTTQIIIDTKTEELDNEDQLPNIQEEENEEDPELQPLGEESEEEREDSKI
TDADMKRSLVDVCPAEPSPHESEVSDQALQADPVSPPVTTQPQRATSLPPDADQEEEPPE
EGCGVPASCSGIKSWILRIPHASTCLSSLHLLKNNNVPLPKMPSDLLLLYQEISQLPKQA
NQCFQNVIHRLNILKPMYLLILSFTDLIYVVWLFFVTLAWNWNAWLIPVRCTFPYQTSEN
IHWWLLMDYFCDGIYILDIFVMQPRLQFVRGGDVVCDKIAMRDNYRQTERFKMDVISLFP
LDFLYVFTGVKSLLRFPRLLKYNAFFEFNDRLEAVMSKAYIYRVIRTSAYLLYSLHCNAC
IFYWGSDYEGLGSTKWVYNGKGNSYIRCYYFAVKTLITIGGLPDPTTVFEIVFQMLNYFV
GVFAFSIMIGQMRDVFGAATAGEAYYRHCVDSTVKYMSSYKIPREVQNRVKIWYDYTWKS
QGMLDEQELLMQLPDKMRLDIAADVNYSIVSKVALFQGCDRQMIFDMLKRLKSVVYLPGD
FVCKKGEIGREMYIIKAGEVQVVGGPDGMTVFVTLRAGSVFGEISLLAGGGGNRRTANVK
AHGFANLFILDKKDLAEILVHYPESQKLLRKKAKKMLTKDKKPADEKGQAKETGEVIPQR
PETHKLYKAALEVGTGQTFAKLKETYKGATLEPSTPASGRTSTAPVPPPSPMHRRSPIPR
PHVPDEDDMVSETTDSTMIIRMTPRVEGEEILSVEISPGEGVEAEAEDPSKTTDK
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgtttagctgggtgataaaggttgttccccagcctccagcatctcctgggaagctggca
gaggaggaccagaccaatgcttccactgcagcaccagatgtgacgaaaaaagaggaagta
aaacaagaaacttccaagccaacggaggaggtctcagaggaaaacagctctcagagtagg
gttttgagttggctctctcatgggttcagcagtgctctccctcagccagtaaactcctct
aaactggccaacagtgaagttaagcatgaggagaatgcagtgagcagcagtaacacatcg
gaccaggctggaatgataggctggattgtgcagggactgggaaaagtggttccacagcca
gatgagaaatacaagggtcacacagagccagaggaggtcactgagcttgcagttccagtg
gttaaagtggatcctccagtgcaagaggtcaaagccgttcgtgatgctgagccactgcct
catattcctgtggtggaggttgtgtctgatgaggacccagacactgctaatgtgcccttc
tctcccagagtaatagaatggattaagcatggttttgagaaggtagttccacattctcct
gtccatcttcatcctcccgctgctacagaggcacccgcccagaaggctgcttctgctcct
gtgactccctgcaaacaagagccagcacctgcacctgcaccaacacctgctcctgcacct
ccaccaccgcctgcacctgcacctgcgccagcacctccacctgcaccttcatctgcacct
gcagctcctgagcagcctaaagtagctgaggattccaaaggcacaaatgtggttggctgg
attgtacaggggttcggacgcatcataccacaaccagtactgaaaccaaaagaggacagc
tgtgatgtcgttcaaaacgtctgcatcctgcaggacccgtgtgatatggtgctggaggag
gtggactcagactgggaggcccagcagagggagcagggctcggggcaggacgtccaggct
gaggagcaggtgccacaggagggctcatccctgctgcaggtgctgcccaatatcctgccg
cacatgctggccatgcaggagcaggaggacgcagagacccagactgagcgctggatgcct
ctcattgagagcatcaagaaggaagcagaggagattgccatagcaaacatagaggagaga
cttcagcaggagtgtgtggaagcggctcgtatagcagaggatctggcccggcaggctgca
gaattggccgtcagacagctggaggaagagcaaaccacacagatcatcatcgacacgaaa
actgaagagctggacaatgaggatcaactgccaaatatccaggaggaagagaatgaagaa
gatccggagttacagccgctcggtgaagagagtgaggaggagagagaggatagtaagatc
acagatgctgacatgaaaaggagcctggtggacgtctgcccggcggagccctcgccgcat
gagtctgaggtttcagatcaggcactacaagcagatccggtctcaccacccgtgaccact
cagcctcagcgagccacatctttacctcctgatgctgaccaggaagaggaacctcctgaa
gaaggatgtggagtgcctgctagctgttctggcataaagagctggattcttcgcatcccc
catgcttccacatgtctgagcagcttacacctgctgaaaaacaataatgttcccctgccc
aagatgccctccgatctcctgctgctataccaggagatatcccagcttccaaaacaagcc
aaccagtgcttccagaacgttatccatcgcctcaacatcctcaagcccatgtacctgctg
attctttctttcacagacttgatctacgtggtgtggctgttctttgtgaccctcgcgtgg
aactggaatgcttggctgatccctgtgcgctgcactttcccgtaccagacgtctgagaac
attcactggtggctgctgatggactacttctgtgacggcatttatattctcgacatcttc
gttatgcagcccagactgcagtttgtgagaggaggggacgttgtgtgtgacaaaatagca
atgagagacaactacaggcaaacagagcgattcaagatggatgtgatcagtctctttcca
ctggatttcctgtacgtcttcacaggcgtcaaatctctcttgcggtttcctcgccttcta
aagtacaatgcattctttgagtttaatgatcgtctggaagctgtgatgagcaaagcctac
atttacagggtgatccggacgagtgcgtacctgctgtactctctgcactgtaatgcctgt
attttctattggggttctgactatgaaggactgggttctaccaaatgggtctataatggc
aaaggaaacagttatattcgctgctactactttgctgtgaagactctgatcaccatcgga
ggtttgcctgaccccaccactgtctttgaaatcgtcttccaaatgctcaactacttcgtg
ggagtctttgctttctccatcatgattggtcagatgagagatgtatttggagccgccact
gcaggtgaggcctattatagacactgtgtggacagcactgtcaaatacatgagttcctac
aagatcccccgcgaggtccagaaccgcgtcaagatctggtacgattacacctggaagtcg
caaggcatgctggatgaacaggagttacttatgcagctgccagataagatgcgtctggac
atcgctgcagatgtcaactacagcattgtcagtaaagtggcgctttttcagggatgtgac
agacagatgatatttgacatgctcaagaggctgaaatccgtggtgtaccttccgggagac
tttgtttgtaaaaaaggtgagatcggccgagagatgtacatcatcaaagctggagaggtg
caggtggttggaggacctgatgggatgacggtgtttgtgactctgagagctggctctgtg
tttggggaaattagtttgctggcgggtggtggtgggaaccgacgaacagctaacgtaaag
gcccatggttttgctaacctcttcatcctggataagaaggacctggcagagatcttagtg
cactaccccgagtcccagaagctactgcgcaagaaggccaagaaaatgttgaccaaagat
aagaagcctgcagatgagaagggccaggctaaagagacgggtgaggtcatccctcagcgg
ccggagacgcacaaactatacaaggctgcactggaggttggcacgggacagacttttgcc
aagctgaaggagacatataagggagcaactctagagccatccactcccgcatccggcagg
acctccacagctccagtgcctcctccctcacccatgcaccgccgttcacccattccccgg
cctcacgtcccagatgaagatgacatggtatcagagaccaccgacagcaccatgatcatc
cgcatgactccccgcgttgagggagaggagatcctatctgtggaaatcagtcctggagag
ggagtggaggcggaggcggaagatccaagcaaaactactgacaagtga
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