KEGG   Sinocyclocheilus rhinocerous: 107722164
Entry
107722164         CDS       T04916                                 
Name
(RefSeq) collagen alpha-2(IX) chain-like
  KO
K08131  collagen type IX alpha
Organism
srx  Sinocyclocheilus rhinocerous
Pathway
srx04510  Focal adhesion
srx04512  ECM-receptor interaction
srx04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:srx00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    107722164
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    107722164
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    107722164
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:srx00535]
    107722164
Proteoglycans [BR:srx00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   107722164
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 107722164
NCBI-ProteinID: XP_016385905
LinkDB
Position
Unknown
AA seq 691 aa
MDRFFIIFRSLVLLQVLCLALSQVTGPPGQQGPTGPPGPAGTPGADGIDGEKGPPGPPGP
AGQKGESGESGPDGSPGEDGIDGLIGAKGERGPRGNPGPKGQPGPGGSQGRPGPGLPGLP
GAAGPIGLPGQIGTTGPKGDMGSPGAPGLTGPPGKPGPPGKFLGVEEGSADFQCPTNCPP
GPKGPQGLQGVKGHKGRAGVLGDPGSIGKVGVKGEVGISGEQGIPGPPGPQGLRGYPGMV
GPKGETGPRGYKGILGPIGIPGRPGEEGPQGPPGEPGDKGDMGGSGIRGPQGVVGKKGEN
GLPGIDGKDGTPGIPGIKGATGQNGRPGAPGLQGDAGLPGMPGAKGEIGIKGETGTRGLM
GMQGPPGPQGEPGPPGEAGMEGVPGPKGDRGERGPVGPPGIVGLPGSKGERGPMGVPGAQ
GLTGTKGDKGFQGKVGSKGDVGDPGVEGLAGEKGEKGQSGEPGPKGQQGVTGDQGNNGPT
GDPGKPGDQGPAGLPGPRGLHGERGVPGMPGIQGTPGRDAIDQHIIDVVLKMLQEKLAAV
AVSSKRAVLGGAGVMGPPGPPGPPGPPGPQGPHGLLGGRGIPGIIGGPGQIGNTGLKGKR
GAKGERGDPGRPHPGQPGPPGLPGPPGLDGVARDGRPGERGPQGAAGEPGRPGKAGPLGL
PGFCEAAACLAASAYTSPRLQEAGTVKGPST
NT seq 2076 nt   +upstreamnt  +downstreamnt
atggatagattcttcatcatcttcagaagcctggtcctgttgcaggtgctctgcttggcc
ttatcacaagtgaccggtccacccggacagcagggccccactggtccccctggccccgct
ggaactcctggtgccgacggcattgatggtgaaaagggtcctcctggacctcctggacca
gcaggtcaaaagggagagtcaggtgagtctggtcctgatggatctccaggggaggatggc
attgatggtttgattggggctaagggtgagaggggccctcgtggtaatcctggaccaaag
ggtcagccagggcctggtggatcacaagggcgaccgggacctggactgcctggacttcct
ggagcagcaggccccattgggcttcctggacaaattgggactactgggccaaagggtgac
atgggaagtcctggagctccaggattaaccggacctccaggaaagccaggtccaccagga
aagtttttgggtgtagaggaaggcagtgctgacttccagtgtccaaccaactgtccacct
gggccgaaaggtcctcagggcctacagggagtgaagggacataaaggtcgcgctggggta
ttgggagatccaggaagcatcggaaaagtgggtgtaaagggtgaagtgggcatctccggt
gaacaaggaataccaggccctccaggtccacagggtctgagagggtatccaggaatggtg
gggcccaaaggcgagacgggaccacgtggttataaaggaattttaggaccaatcggcatc
cctggacgccctggtgaagagggaccccaaggaccacctggagagcctggtgacaagggc
gacatgggagggagtggaatacgagggcctcagggagtggtcggaaagaagggagagaac
ggtcttccaggaattgatggaaaagatggtactcctggcatcccaggaataaagggagct
acaggacaaaatggaagacctggagcccctggtcttcagggagacgctggtttgcctggt
atgcctggagccaagggtgaaattggaattaagggtgagacaggaacccgaggcttgatg
ggaatgcaaggtcctccaggacctcaaggagagcctggtcctccaggtgaagctggcatg
gagggagtcccaggtccaaagggcgacaggggcgaaagaggaccagttgggcctcctggt
attgttggcttgcctggcagtaaaggagagaggggacccatgggcgtcccaggtgctcag
ggtctaactggaactaagggtgacaagggattccaaggcaaagtgggatcaaagggagac
gttggtgatcctggtgtagagggattggctggggagaaaggagagaagggacaatctggg
gagcccggacctaagggacagcaaggtgtgaccggtgatcaagggaacaacggccctacc
ggagatcccggtaaaccaggagaccagggtcctgcaggcttacctggtccacgtggcctg
catggagaaagaggagttccagggatgccaggaatacaaggaacacctggtcgtgatgct
atagatcaacacatcattgacgttgtcctgaagatgcttcaagagaagttagcagcggta
gcggtgagctctaagagagccgtgctgggtggagcaggtgtgatgggccctccaggtcct
ccaggaccacctggacctccaggacctcagggtcctcatggactgctaggcggccgtggc
attcctggcataatcgggggcccaggccagataggaaacactggtcttaaagggaagagg
ggtgcaaagggagagagaggagatcctggacgaccacatcctggccaaccgggaccacct
ggactgccaggtcctccaggtcttgacggtgtggctcgtgacggtaggccaggcgagcga
ggacctcagggtgcagcgggtgagccaggccgtcctggaaaggctggtcctctcggtctt
cctggattttgtgaagcagctgcatgtttggcagcatccgcctacacttctcccagatta
caagaggcgggaacagtaaagggcccatccacttaa

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