KEGG   Sinocyclocheilus rhinocerous: 107727783
Entry
107727783         CDS       T04916                                 
Name
(RefSeq) cleavage stimulation factor subunit 1-like
  KO
K14406  cleavage stimulation factor subunit 1
Organism
srx  Sinocyclocheilus rhinocerous
Pathway
srx03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:srx00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107727783
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:srx03019]
    107727783
Messenger RNA biogenesis [BR:srx03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     107727783
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd CSTF1_dimer Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_EML ANAPC4_WD40 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_TEP1_C NBCH_WD40 WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_EIPR1 Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st Beta-prop_VPS8 Beta-prop_NWD2_C PROPPIN Ge1_WD40 Beta-prop_WDR75_2nd Beta-prop_SPT8 DUF7099 Frtz
Other DBs
NCBI-GeneID: 107727783
NCBI-ProteinID: XP_016393257
LinkDB
Position
Unknown
AA seq 352 aa
MFRPKPTLKDRQHLYRLIISQLLYDGYTAIANSLISEVKPQSVVSPSEQLMQLAKTGMEN
DDSAVQYAIGRSDTVAPGVGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG
QLIATGSADASIKILDTERMLAKSAMPLEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA
FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKHIQEAEMLRSISFHPSGDFLLVGTQHPT
LRLYDVNTFQCFVSCNPLDQHTDSICGVCYNPSANSYVTCSKDGSIKLWDGVSNRCVTTF
EKAHDGAEVCSAVFSKNSKYILSSGKDSVAKLWEISTGRTLVKYTGKMENYE
NT seq 1059 nt   +upstreamnt  +downstreamnt
atgttccgacccaagcccacactgaaggacagacagcacctctacaggctgatcatcagc
cagctgctgtatgacggctacaccgccatcgccaacagcctgatcagtgaggtgaagccc
cagagtgtggtgtctccatcagagcagctcatgcagctggccaagacaggaatggagaac
gatgacagtgcggtacagtacgccattggccgctcggacaccgtggcgcccggtgtgggc
atcgacctggaatttgatgcagacgtgcaaaccatgtccccagaagcatcagagtatgag
acctgctatgtgacgtctcataaggggccgtgccgtgtggccacctacagccgcgatggg
cagctcatagccacgggctccgctgacgcctccattaagatcctggatactgagcgcatg
ctggccaaaagcgccatgcctcttgaggtgatgatgaacgaaacagcccagcagaacatg
gagaaccaccctgtaatcagaaccttgtatgatcatgtggatgaggtcacatgcctcgct
tttcacccgaccgagcagatcttagcctctggctctcgtgattacaccctcaaactcttt
gattattcaaagccatctgcaaaaagagccttcaagcacatacaggaagctgaaatgttg
cgctccatctccttccatccatctggggatttcttactagtcggcacgcaacacccaacc
ttgcgtctttatgacgttaacactttccagtgttttgtgtcctgcaaccctctggaccag
cacacagacagcatctgcggagtctgttacaatcccagcgctaacagctacgtcacctgt
agcaaagacggcagcatcaagttgtgggatggagtgtcgaaccggtgcgtaaccaccttt
gagaaagcccacgacggcgctgaggtctgctcggctgttttctccaagaactccaagtat
attttgtccagcgggaaggactctgttgctaaactctgggaaatttctacaggccggact
ttggtcaagtacacaggtaagatggagaattatgagtag

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