Sinocyclocheilus rhinocerous: 107737670
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Entry
107737670 CDS
T04916
Name
(RefSeq) agrin-like
KO
K06254
agrin
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04512
ECM-receptor interaction
srx04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107737670
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107737670
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
srx00535
]
107737670
Proteoglycans [BR:
srx00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
107737670
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_G_2
Kazal_2
Kazal_1
NtA
Laminin_EGF
SEA
EGF
CFAI_KAZAL
Laminin_G_3
hEGF
Motif
Other DBs
NCBI-GeneID:
107737670
NCBI-ProteinID:
XP_016404746
LinkDB
All DBs
Position
Unknown
AA seq
1988 aa
AA seq
DB search
MGFSRKKAFYWPVWSFAVVFVILSQRCHGSCSEKELEKREEEAYIVLTGTVEEILNMDPV
HNTYSCKVRVWRYLKGKTMVNGEVLLDGGNKVMIGGFGDPHICDNQVATGDTRIFFVNLA
PEFMWPSHKNELMLNSSLMRITLRNLEEVEHCVEDKPVHFTPAPPPDGCRGKLCGFGAVC
ERDPTDPSKGECVCKKIVCTSVVAPVCGSDSSTYSNECELEKAQCNTQRRIKVMRKGPCD
LKDPCSEVTCSFGSTCIQSSDGLSAKCMCPLSCENVPKHVVCGSDGLDYQSECELHMKAC
ATQKNIRVHHQGRCDPCSDTLNSLSVACRVNPKTYKQFTFAPADSCPPDSTPICASDGHT
YYSECQMERTALQNNLELKKVSSGSCKENGGCPNGCKFNAMCLLENGEFQCSCDPIQCDG
TYKPLCGKDGKTYPNDCERKLEECRTETDIPIKQQGPCGWLEWPSLQLQPSWHYLEGNHT
SFSADESCNNCSFGAICDAQTGRCVCPKGCLETRQPVCGSDGMTYENECKLNVEACTKQL
DLRVVAHGECKTCGSTVCSWGARCVQNQCECQQCTGQPVKPVCGSDGNTYNNDCELRLAS
CKKQRKIEVAKPGICDEDCGSGGSGSGSETCEQDRCRRYGGSWDDDTEDDRCVCDFTCQT
VPRSSVCGSDGNTYTSECELKKARCEKQMDLLLQSQGPCSAIISAPTELVASQHCSETVY
GCCQDNKTAALGVGLAGCPSVCQCNHYGSYGGTCDPSTGQCSCKPGVGGLKCDRCEPGFW
NFRGIVTENMSGCTPCNCDGVGSVRDDCEQMSGLCSCKPGVKGMKCNVCPDGSKMGANGC
DKGPEAPKSCDELVCHFGASCVEVNGQAHCECPSPDCDEKNKTKVCGSDGVTYADRCQLR
TIACRQDKEITVEHLGQCKESIELTAKPTPFPTTHRTTPPTAHVKITKQRHGHTTTTTSS
ILKDLDSFVVEALPPPKVVEAGKYSSTFTTHRPTTLNKPPRTSSPPLDSSPDFDESGSGE
PSGDDEMVSGMAESGEEPLGTTVATTTLPTAEERSSCDNTPFGCCPDGKTAAISSENTNC
PSTMRFSGFLHLDKVEGQEVFYTPEMEDPKSELFGETARSIESALNELFRKSDVQKDFQS
VRVKNLAPSNSIIAFIEVHFDPDTRFSVEAIEGALLKQLKASKDTGILVKKPEEENIRIT
TYGLSAVPFFTTTTTTVASVTTPTTTTLSPTSAFTTLRPTTTRWPFTSRRTTTDAPATTT
PSKAPTTTVSLKNRLAVHGNKPCDSQPCRHGGTCEEEDNDFTCICPAGRGGAVCEKVIKY
FIPSFGGKSYLAFRTMRAYHTVRIAMEFRASEMTGILLYNGQKGKKDFLSLALIEGHVEL
RFNTGSGTASVISKVLVRPGRWHQLVVVRNRRNAMLSVDNEPSVEGQSPPGTDGLNLDTD
LFIGGVLEDMIPDVKERTSVSTGLVGCIRMLDVNNLFYNLQENGDSVLYGSGVGECGNNP
CMPNPCKNGASCQVKEAEMFHCKCVNGFSGPTCADAHNPCDPNKCHPSSRCQVLPEGGYK
CECPMGREGKHCEKVSDKGGAFIPYFTGDSFLELKGLHLYGQDLRQKFSMTVVLLANDSK
GMIFYNGQKTDGKGDFISLSLNDGILEFRYDLGKGPAVIRSKEKIKLNEWSTVNLERASR
KGEISINGKDPVRGEAPNQHTDLNLKESLFVGGAPDFRKVARAAAIKDGFKGAIQKITLM
GIPILKSDNALHSSDVSMYPYHPCSKDVCENGGRCNPLLDSYECVCRHGFTGQHCQDAII
EKSAGDTEAIAFDGHTFIEYHNGVTKSEKALLVNKFELSIRTEATHGLILWSGKGVERSD
YIALAIVDGRVQMTYDLGSKPVVLRSSVRVNTNRWIRIKASRALRDGSLQVGNEAAVTGS
SPLAATQLDTDGALWLGGLEELSVARRLPKAYSTGFVGCVKDVIVDGVELHLVEDALNSP
KIVHCSAK
NT seq
5967 nt
NT seq
+upstream
nt +downstream
nt
atgggcttttctcggaaaaaggcgttttattggcccgtttggtcgtttgctgttgttttt
gtgattttgagtcagcgttgtcatggaagttgttcagaaaaggagctggaaaagcgagaa
gaagaggcgtatatagttttaactgggactgtagaggagatcttgaacatggatccggtg
cacaacacttattcctgcaaggtcagggtatggcgttacctaaaaggcaagaccatggtg
aatggagaggtgctgctggacggaggaaacaaggtgatgatcggcggtttcggagacccc
catatttgcgacaatcaggtggccaccggagatacgcgcattttctttgtcaacctggcc
cctgagttcatgtggccgagccacaagaacgaactgatgctcaactcgagcctgatgagg
attactctccgcaacttggaggaggtggagcactgcgttgaagataaacctgttcacttc
acaccggctcctcctcctgatggttgcagaggaaagctgtgtggatttggagcggtgtgt
gagagagacccgactgacccctctaaaggagagtgtgtttgtaagaagattgtatgcacg
tctgtggtggcgccggtgtgcggatctgactcctctacctattccaatgagtgtgagctg
gagaaggcccagtgcaatacacagagacgcatcaaggtgatgcgcaaaggcccctgtgac
ctgaaggacccatgcagtgaggtgacctgtagctttggcagcacctgcatccagtcatcc
gatggtctgtccgccaagtgcatgtgtcctctgagttgtgagaacgtccccaagcacgtg
gtgtgtggcagcgacggcctggactaccaaagtgaatgtgagctccacatgaaagcctgc
gccactcagaagaacatccgcgtgcatcaccaaggccgctgcgatccttgcagtgacact
ctgaacagcttgagtgtggcctgtcgggtgaacccaaagacctacaagcagtttaccttc
gccccagccgattcctgcccgcccgacagtacacccatctgcgccagcgacggccacact
tactatagcgagtgtcagatggagcggacggccctgcagaacaacctggagctcaagaag
gtctcttcaggcagctgcaaggagaacgggggctgcccgaacggttgtaagttcaacgcc
atgtgtttgctggaaaacggagagtttcagtgttcctgcgaccccatacaatgtgacggc
acgtacaagcccctgtgcggaaaggatggaaagacataccccaacgactgcgagaggaaa
ctcgaagagtgccggaccgaaacagacatccccatcaagcaacaagggccctgtggatgg
ttggagtggccctccctgcagcttcagccctcatggcactatttggaagggaatcacact
tccttttcagcagatgagtcctgcaacaactgctcgtttggcgcgatctgcgacgctcag
actggccggtgcgtgtgccccaaagggtgtttggaaacacggcagcccgtgtgcggcagc
gacgggatgacgtacgagaacgagtgcaagctgaacgtggaagcctgcactaagcagctg
gatctcagagtggtggcccatggagaatgcaaaacctgtggcagcactgtgtgtagctgg
ggagcacggtgcgtgcagaaccagtgtgagtgtcagcagtgcacgggtcagccagtgaaa
cccgtgtgcggcagtgacggcaacacctacaacaacgactgtgagctgcggctggcctcc
tgcaagaaacagaggaagattgaggtggccaaacctggcatctgtgatgaagactgcggt
tcaggaggctcaggttcaggatctgaaacctgcgagcaggatcgttgtcgacgatacggc
ggatcatgggatgacgacacagaggatgaccgctgcgtgtgtgacttcacctgtcaaaca
gtgccgcgcagctcagtgtgcggctctgatgggaacacatacaccagcgagtgtgagctg
aagaaggccaggtgtgagaagcaaatggacttgctgctccagagccaaggtccctgctca
gctatcatatcagctcctacagagctcgtcgcctcccagcactgtagcgaaactgtttac
ggatgctgccaagacaataagaccgctgccctgggtgttggactggctgggtgtcctagt
gtgtgtcagtgtaatcattacggctcatacggaggcacctgcgacccgtccaccggccag
tgctcctgtaaacccggcgtcgggggactcaagtgcgaccgctgtgagcccggattctgg
aacttccgaggcatcgttacagagaacatgagtggctgcacaccgtgtaactgtgatgga
gtgggttcggttcgtgacgactgtgagcagatgtcagggctgtgctcatgtaagcctgga
gttaagggcatgaaatgcaacgtgtgccccgacggcagcaagatgggagccaacggctgt
gacaaaggacctgaggcacccaagtcctgtgatgagcttgtgtgccactttggggcatca
tgtgtggaggtgaacggacaggctcactgtgagtgcccgtcgccagattgtgatgagaaa
aacaagaccaaggtatgtggttctgatggggtcacctatgcagaccgatgccagctgagg
actatcgcatgcagacaagataaagagatcactgtggagcatttaggccagtgcaaagaa
tccattgagctgacggccaaacccacccccttcccaaccacccaccgcaccacccctccc
accgctcacgtcaagatcaccaaacagcgccatggccacaccaccaccactacttcaagc
attctcaaggatctggacagcttcgtggtggaggcactgcctccaccgaaggtggtcgag
gcaggaaagtactccagcactttcaccacccaccgccccaccacactcaacaaaccaccc
cgcacctcatccccacccctggactccagccctgactttgacgaatcgggcagtggagag
cccagtggggacgacgagatggtgagcggaatggcggagagcggagaagagccacttggt
acaacagtagcaactaccactcttcccacagccgaagaacggtcttcctgtgacaacaca
cctttcggctgctgtcccgatgggaagacggccgccatcagctctgagaatacaaactgc
ccctccaccatgcgtttcagtggcttcctgcacctggataaggtagagggtcaggaggtc
ttctacacgcctgagatggaagaccccaagtcagagctgttcggcgaaacggctcggagc
atcgaaagtgctctgaatgagttgttccgcaagtcagatgtgcagaaagacttccagagt
gtccgtgtgaagaatctggcccccagcaactccataattgcctttatcgaggttcacttt
gacccagacacaaggttcagtgtggaggctattgagggagcccttctcaaacagctcaag
gcgtctaaagacactggtatccttgtgaagaaacctgaggaagagaacatccgcatcacc
acctatggcctttcagctgttcctttcttcaccaccaccacgaccaccgtagcgtcagtc
acaactcccaccaccactacgctgtctcccacttctgcatttaccacgctccgcccaacc
accaccagatggcccttcaccagccgcaggaccaccacagatgcaccagccaccaccact
ccatccaaggcccccacaaccacagtctcgctgaagaacagactggcggtccacggcaac
aagccgtgcgactcccagccctgccgtcacggtggaacctgcgaggaggaggacaatgac
ttcacctgtatctgtcctgcaggaagaggaggagctgtgtgcgagaaagttataaagtac
ttcataccatcctttggtggcaagtcttacctggctttccgaaccatgagggcctaccac
actgtgcgaattgccatggagttcagagcttcggaaatgacagggatattgctgtataat
ggccaaaagggcaaaaaggacttcttgtctctggcactgattgagggacatgtggagctc
aggtttaacactggttctgggacggcttcagtgatcagtaaggtcctggtaagaccgggt
cgctggcatcagctcgtagtagtgcgtaacaggcgtaatgccatgctgagcgtggacaat
gagccgagcgttgaaggacaaagtcccccaggaacagatggactcaacctggacacagac
cttttcatcggaggagtgcttgaagacatgataccagatgtaaaggagaggacgtcagtt
tccacaggcctggtgggctgcatccgcatgctggacgtcaacaacttgttctataacctg
caagagaatggcgacagcgttttgtacggctcaggcgtgggtgagtgcggcaacaatcca
tgcatgccgaacccctgcaagaacggagcctcctgccaggtcaaagaagccgagatgttc
cactgcaaatgtgtcaatggtttctctggtcctacctgcgctgacgcccacaacccttgc
gaccccaataaatgccacccgtcatcgcggtgccaggtccttccggagggaggttacaaa
tgcgaatgtccaatgggacgtgaaggcaagcactgtgaaaaagtgtcagacaagggaggc
gctttcattccttactttactggagattctttcctggagctcaagggccttcatctctac
ggccaggatctgaggcaaaagttcagcatgactgtggttctgttggccaatgactccaaa
ggcatgatcttctacaacggtcaaaagactgacggcaaaggagatttcatctctctctcc
ctgaatgatggtatcttggagtttagatatgacctgggcaaaggaccagctgtcattagg
agtaaagaaaaaatcaagctgaacgaatggagcacagtgaatctggagagggccagcaga
aaaggagagatcagcattaacggcaaagaccccgtcagaggagaagcgccgaatcagcac
acagatcttaatctgaaggagtcgctctttgtgggcggagcccctgatttccgcaaagta
gccagagctgctgcgatcaaagatggcttcaaaggggccattcagaagattactctgatg
ggaattccaatcctgaaatctgataacgcccttcactccagtgatgtgtccatgtatccc
taccacccctgctccaaagatgtttgtgagaacggaggccgctgcaaccctctgttggac
agctacgagtgcgtctgccgccacggattcactggacagcactgccaggacgcaataatc
gagaaatctgctggggacaccgaggccattgcgttcgatggtcatactttcattgaatat
cacaacggagtcaccaagagcgagaaggccctgctggtgaataaatttgaactgagcatc
aggactgaggctactcacggtctgattttgtggagcggcaagggagtggagcgatccgat
tacatcgccctcgcaattgtggacggccgtgtgcagatgacctatgaccttggctccaag
cctgtggtgctgcgctcctctgtacgggtcaacaccaaccgctggatacgaatcaaggcc
agcagagcgctcagagacggctcgctgcaggttggtaatgaggcagctgtcactgggtca
tcacccttggcggccacacagctggacacagacggcgctctctggttgggtggtctggag
gagctgtccgtagctcgccggttgcccaaggcttacagcacaggctttgttggctgcgtg
aaagacgtgatagtcgacggggtggaactacatctggttgaggacgccttaaacagtccc
aaaattgtacactgttctgccaaatag
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