Sinocyclocheilus rhinocerous: 107753862
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Entry
107753862 CDS
T04916
Name
(RefSeq) collagen alpha-1(IX) chain-like
KO
K08131
collagen type IX alpha
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04510
Focal adhesion
srx04512
ECM-receptor interaction
srx04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107753862
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107753862
09142 Cell motility
04820 Cytoskeleton in muscle cells
107753862
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
srx00535
]
107753862
Proteoglycans [BR:
srx00535
]
Extracellular matrix (ECM) proteoglycans
Others
107753862
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
107753862
NCBI-ProteinID:
XP_016425619
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MAHAGALRASLLLILLQLVLIISAQRGPFGPRGPPGPPGLPGFSGVDGIDGDRGPGPGPD
GPPGLDGDNGKDGLNGLPGKPGADGLTGPRGAPGPVGPPGQKGEPSEPGPRGAIGVGEDG
EAGADGEDGLPGELGKAGPPGSRGPRGPVGDPGLAGPRGPPGVWDGKELCPNACTSGLNG
YTGLPGMKGHKGVKGESGEPGRQGHKGEEGDQGAPGEPGAQGLPGPQGLRGITGMMGPKG
DRGLRGNVGDLGPQGIQGAPGDRGQRGKVGETGPKGAQGPRGLQGLLGLPGPKGETGLPA
VDARDGIPGLPGVKGLPGKVGSPGEAGLQGFPGLPGISGAKGHMGEKGNTGDPGVAGLIG
NNGKTGERGEQGEVGPVGPRGGPGERGVRGPDGSAGSPGARGAKGDPGLPGLPGPAGFIG
QKGDRGAVGLTGPKGEQGPPGEEGTPGDKGDVGDEGEPGEKGSTGKPGEAGNKGPEGGRG
QPGPEGTAGEPGPRGMQGDSGVPGLPGAQGRPGRAPIDEHIKQVCMRVLHGQLAQLAASL
TRPESGISGLPGPPGPPGPPGPGGDNGFPGHPGSRGLPGLKGPLGLIGRKGPKGDQGDRG
DRGPTVEGSKGIPGPPGLPGDPGKLAYGSNGRDGLRGPAGAPGMPGVPGPPGPPGPNGYC
ESSQCVLQAVASPISVKESSVKGPDGL
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacgccggggctctccgcgcgtcgctgctgctgattttactgcagttagtcctg
atcatctcagcacagagggggccatttggtccaagaggaccacctggacctccagggctt
cctggtttttctggtgttgacggcattgatggtgataggggacctggccctggcccagat
ggccccccaggccttgatggggacaatggcaaggatggattaaatggccttccaggaaaa
ccaggagcggatggtttgactgggccccgtggtgcccctggccctgttggccctcctgga
caaaaaggtgaacctagtgagccgggaccaaggggagccattggtgttggagaggatggt
gaagctggtgctgatggggaagatgggttacctggagagctgggcaaagctggacctcct
ggaagtcgtggaccgagaggtcctgttggtgatccaggactggcagggcccagaggccct
cctggagtctgggatggtaaggagctgtgtccaaatgcctgtacttctggcctgaatggt
tacacaggtcttccaggcatgaagggccacaaaggtgtcaaaggtgaatcaggtgaacca
ggaaggcaaggacataagggtgaagaaggagaccagggagcacctggagagccaggagca
caaggccttcctggtccacagggtctcagaggaatcacagggatgatgggccctaaaggg
gacaggggactccgtggaaatgttggcgacctgggccctcagggtattcagggcgctcct
ggtgatcggggtcaaagaggaaaagtaggtgagactggaccaaaaggagctcagggacct
cgggggttgcaaggacttttgggtttacctggaccgaaaggagagactggtctgcctgcg
gtggatgctcgtgacgggattccagggctgcccggagtgaagggtcttcctggaaaagtt
ggctcgcctggtgaggctggacttcagggatttccaggtttgccaggcatttcaggagca
aaaggtcacatgggtgaaaaaggaaatactggtgatccaggtgtggcaggtctgattgga
aataatggaaaaacaggtgaacgtggcgagcagggagaggtgggaccagtcggcccaaga
ggtgggccaggtgagagaggagtgagaggtcctgatgggtctgcaggctcaccaggtgca
aggggtgctaaaggagatccgggccttcctggtcttccagggcctgctggcttcatcggg
cagaaaggcgacaggggcgctgttggtctaactggtccaaaaggagagcaaggaccacct
ggtgaagagggaacacctggagacaaaggagatgttggtgatgagggagagccaggcgag
aaaggatcgacaggaaaaccaggagaggcaggaaataaaggtccagagggtgggcgtggc
caacctggacccgagggcacagctggagagcctggcccaagaggcatgcaaggagacagt
ggggtacctggactgcctggggcacagggacgaccaggccgagcacccatagatgagcac
atcaagcaggtctgcatgagggttttgcacggacagctcgcccagttggcagccagtctg
acgaggcccgagtcgggcatctctgggttgccaggtcctcctggtccccccggccctcca
gggcctggtggagacaatggcttccctgggcatcctggaagcagaggactgccgggtctc
aaagggcccctggggctcatagggaggaaagggcccaaaggtgaccaaggtgacagggga
gatagagggcccacagtggaggggtctaaaggaatacctggaccaccagggctcccaggt
gaccctgggaaactagcatatggcagtaacgggcgtgacggtctgagaggaccagcaggt
gctcctggaatgccaggtgtgcccgggccaccaggtccccccggccctaacggatactgc
gagtcatctcagtgcgtgcttcaagcagttgcgagtccgatatctgtcaaagagtccagc
gtgaagggaccagatggtctatga
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