Sinocyclocheilus rhinocerous: 107754830
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Entry
107754830 CDS
T04916
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03022
Basal transcription factors
srx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107754830 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
107754830 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srx03021
]
107754830 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
srx03400
]
107754830 (gtf2h4)
Transcription machinery [BR:
srx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107754830 (gtf2h4)
DNA repair and recombination proteins [BR:
srx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107754830 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
107754830
NCBI-ProteinID:
XP_016426919
UniProt:
A0A673I523
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MKLRVQLQCKNLHEYLKELSPEILDRLYNHPATCLAVYRELPSLAKNYVMRMLFLDHPLP
QAAVALWVKKDSQKDHDQCVSVLTGLRLWHSQHLQGGLQGFVLNLVFKDNLRIALLGGGK
PWADEGSNLGPDRHARDVESLDRYAMERWEVILHFMVGSPSAAVSQDLAQLLIQAGLMKS
EAGDAPCITSAGFQFLLLDTASQLWYFTLQYLKTAQSRGMDLVEILSFLFQLSFSTLGRD
YSVEGMSESLLTFLQHLREFGLVFQRKRKSRRYYPTRLAITLAAGVTVNPASGTASTALG
ATSGTGDTGFIVVETNYRVYAYTNSELQIALVALFSEMLYRFPNLVVAHVTRESVQQAIA
NGITAQQIIHFLRTRAHPVMLKQTPILPPTITDQIRLWELEKDRLQFTEGVLYNQFLSQA
DFEVLRDRAQGLGVLVWQNPAHRVMVVTPHGHSEVKRFWKRQKSHT
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttcgagtccagctgcagtgcaagaacttgcatgaatatctaaaggaattgagt
ccagagatcctcgacaggctctacaatcacccagcaacatgcctggcagtctacagggaa
cttccatcactggcaaagaattatgtgatgcggatgctgtttttagatcatccactcccg
caagctgcagtcgcgctgtgggttaaaaaagacagtcaaaaagaccacgatcagtgtgtg
tcagtgttaactgggctacggctctggcacagtcagcaccttcaaggtggactccaaggc
tttgtgctcaaccttgtgtttaaagacaacctgagaatagcacttctaggcggtggtaaa
ccgtgggcagatgaaggcagcaacctgggccccgatcgtcacgcaagggatgtcgaaagt
ctcgaccgctatgctatggagcgttgggaggtcatccttcacttcatggtgggctctccc
agcgcagccgtcagccaggatctggcccagctcctcatacaggccgggctcatgaagagc
gaggctggcgatgctccttgtatcacatcagcagggtttcagttcctgctgctggacaca
gcatctcagctgtggtacttcaccctgcagtacctcaaaacagcgcagtcgagaggaatg
gacctggtggagattctttcctttttgttccaactgagtttttccactcttggtagggat
tattctgtggagggcatgagtgagtctctgctcacatttttgcagcatttacgagagttt
ggtctggttttccaaagaaagaggaagtctaggaggtactaccctaccaggttggccata
actctagctgcaggggtcacagtaaaccctgcctctggaacggcttctactgcactcgga
gccacatcaggaacaggagacacaggcttcatcgttgtagaaacaaattaccgtgtatat
gcctacacaaactctgaactccagattgcactagtagctctatttagcgagatgctgtat
cgctttcctaacctggtggttgcccacgtaaccagagagtcggtgcagcaggccatcgct
aacggcataactgcacagcagatcattcacttcttaaggacccgagcacacccagtaatg
cttaaacagacccccatccttcccccaaccatcacagatcagatcaggctgtgggagctc
gagaaagatcgcttacagttcactgagggagtcttatacaaccagtttttatcccaggct
gattttgaagtgttgcgggacagggctcagggtttaggtgtgctggtttggcagaacccc
gctcacagggtcatggtggtgacgccacatggacacagcgaggttaagagattctggaag
agacaaaagagccatacataa
DBGET
integrated database retrieval system