Serratia rubidaea: AXX16_2933
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Entry
AXX16_2933 CDS
T04417
Name
(GenBank) RND efflux system, outer membrane lipoprotein CmeC
KO
K18139
outer membrane protein, multidrug efflux system
Organism
srz
Serratia rubidaea
Pathway
srz01501
beta-Lactam resistance
srz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AXX16_2933
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AXX16_2933
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srz02000
]
AXX16_2933
01504 Antimicrobial resistance genes [BR:
srz01504
]
AXX16_2933
Transporters [BR:
srz02000
]
Other transporters
Pores ion channels [TC:
1
]
AXX16_2933
Antimicrobial resistance genes [BR:
srz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
AXX16_2933
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
AXX16_2933
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
AXX16_2933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF6247
Motif
Other DBs
NCBI-ProteinID:
AML58630
LinkDB
All DBs
Position
complement(3153467..3154888)
Genome browser
AA seq
473 aa
AA seq
DB search
MTQNKLLQRLAVVSLPWLLAGCLSLDPDYQRPALPVTLGDSAAAGQTAGYPQVAWRDYIT
DPRLRQVVALSLDANRDLREAIANIAAARAQYAQSRASLLPTLDAGLDGSRSRALSGSGN
ATAISQSYQAQAGTSAFELDLFGKNRSQTRAQYESYLSSAEAARSTRLSVIATVVEAWIT
LAADRSNLAAAQDTMASAQRSLAVTRNNQRHGIVSLVDVASADTVYQAARADVAEYATLV
AQDNNALVLAVGQPVAADLLPAGIEALAGSMRELSAGVSSQVLLNRPDVLAAEHTLKSAN
ADIGAARAAFFPTISLTASGGVGSASLSSLFSQGAGIWSFAPSISLPIFSGGYNSATLDY
ANAQQKAYVASYEKTVQTAFQEVSDALARRATVHQQLSAQCGNVAAAQQYAQLAELRYRH
GVDSYLNLLTAQRTLYSARQSLIAVQQTHYQNLITLYKVMGGGTALPAADKID
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagaataagctgttgcaacggctggcggtggtttccctgccgtggctgctggcc
ggctgcctgtcgctggatccggactatcagcggccggcgctgccggtcacgctcggcgac
agcgccgcggccggccagacggcggggtatccgcaggtggcgtggcgtgattacattacc
gatccgcgtctgcggcaggtggtggcgctgagcctggacgccaaccgcgatctgcgtgag
gcgattgccaatatcgccgccgcccgcgcgcagtatgcgcagagccgcgcctcgctgctg
ccgacccttgatgccggcctcgacggcagccgctcacgggcgctgagcggcagcggcaat
gccaccgccatcagtcagagctatcaggcgcaggccggcaccagcgcttttgaactggat
ctgttcggcaaaaaccgcagccagacgcgcgcccagtatgaaagctacctgagcagcgcc
gaggcggcgcgcagcacgcgcttatcggtgatcgccaccgtggtggaagcgtggatcacg
ctggcggccgaccgcagcaatctggcggcggcgcaggacaccatggccagcgcgcagcgc
tcgctggcggtgacgcgcaacaaccagcggcacggcatcgtttctctggtggacgtcgcc
tcggcggacaccgtctatcaggcggcgcgcgccgacgtggccgaatacgccaccctggtg
gcgcaggacaacaatgcgctggtgctggcggtcggccagccggttgcggccgatctgctg
ccggcgggcattgaggcgctggccggcagcatgcgggaactgtcggcgggcgtctcgtcg
caggtgctgctgaaccggccggacgtgctggcggccgaacacacgctgaagtcggccaac
gcggatatcggcgcggcgcgggcggcgtttttccccaccatttcgctgaccgccagcggc
ggcgtcggcagcgcgtcgctgtcatcgctgttcagccagggggccggaatctggtcgttt
gcgccgagcatcagcctgccgattttcagtggcggctataactcggcgacgctggattac
gccaacgcccagcagaaggcctatgtcgccagctatgagaagacggtgcagactgccttt
caggaggtgtcggacgcgctggcgcgccgcgccaccgtgcatcagcagctgagcgcgcag
tgcggcaacgttgcggcggcgcagcagtacgcgcagctggcggagctgcgctaccgccac
ggcgtcgacagctatctgaacctgctgacggcgcagcgcacgctgtacagcgcgcgccag
tcgctgatcgccgtgcagcagacccattaccagaacctgatcacgctgtataaggtgatg
ggcggcggcacggcgctgccggcggcggataaaattgattaa
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