Serratia rubidaea: AXX16_4108
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Entry
AXX16_4108 CDS
T04417
Name
(GenBank) Octaprenyl-diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
srz
Serratia rubidaea
Pathway
srz00900
Terpenoid backbone biosynthesis
srz01100
Metabolic pathways
srz01110
Biosynthesis of secondary metabolites
Module
srz_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
AXX16_4108
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
srz01006
]
AXX16_4108
Enzymes [BR:
srz01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
AXX16_4108
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
AXX16_4108
Prenyltransferases [BR:
srz01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
AXX16_4108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AML59790
UniProt:
A0A140F0G3
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All DBs
Position
4410420..4411322
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AA seq
300 aa
AA seq
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MSDFNSQLQSYRQRADRALLDFIAPLPFNDGQLVEAMRYGALLGGKRLRPFLVYATGEMF
GVPPGNLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGQPTCHIKFGEANAILAGDALQT
LAFSILADAEMPDVAVRDRLAMVSELATASGVAGMCGGQALDLAAEDRQINLEELEQIHR
HKTGALIRSAVRLGALAAGEPGRAALRELDRYAAAIGLAFQVQDDILDVIGETAKIGKRQ
GADQQHGKSTYPALLGLDNAQAKARDLYQEALSALDTLTAQSYNTASLRALASFIIERDN
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttcaacagccagctacagagctatcgtcagcgtgccgatcgcgcactgctg
gactttatcgccccgctgccgtttaacgacggccagctggtggaagccatgcgctacggc
gccctgctgggcggcaaacgcctgcgcccgttcctggtgtacgccaccggcgaaatgttc
ggcgtaccgccgggcaacctggatgcgccggcggcggcggtggaatgcatccacgcctat
tccctgattcatgacgatctgccggcgatggacgacgacgatctgcgtcgcggccagccg
acctgccacatcaaattcggcgaagccaacgccattctggccggcgatgcgctgcagacg
ctggccttctctattctggccgacgccgagatgccggacgtcgcggtgcgcgaccgcctg
gcgatggtgtcggaactggcgaccgccagcggcgtggccggcatgtgcggcggtcaggcc
ttggatttagctgcagaggatcgtcagattaatctggaagaactggagcaaattcaccgc
cacaaaaccggcgcgctgatccgctcagccgtgcgtctgggcgcgctagcggcgggcgaa
ccggggcgcgcggcgctgcgcgagctggatcgctatgccgcggccatcggcctggcgttt
caggttcaggatgacattctcgacgtcatcggcgaaactgcaaaaataggaaaacgccaa
ggtgccgatcagcaacacggaaaaagcacctatcccgcgctgctgggcctggacaatgcc
caggccaaagcccgggatctgtatcaggaagccttgagcgctctggatacgctgacggcg
caatcatacaacaccgcgtcattgcgcgcgttggccagctttattattgaacgcgacaat
taa
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