Sphingomonas sanxanigenens: NX02_01880
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Entry
NX02_01880 CDS
T03929
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ssan
Sphingomonas sanxanigenens
Pathway
ssan03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NX02_01880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssan03400
]
NX02_01880
Enzymes [BR:
ssan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NX02_01880
DNA repair and recombination proteins [BR:
ssan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NX02_01880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AHE52137
UniProt:
W0A6N8
LinkDB
All DBs
Position
complement(387823..388650)
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AA seq
275 aa
AA seq
DB search
MIIATYNVNGVNGRLPVLLRWLAERQPDIVVLQELKAPQEKFPLSAIRDLGYDAIWHGQK
SWNGVAILSRVGEIHETRRGLPGDPDDSHSRYIEAAVNGILVGGLYLPNGNPRPGPKFDY
KLRWFDRLVDHAARLLETGLPVMLAGDFNVMPTELDVYKPERLLDDALFAPEVRAAYFRL
LGQGWTDALRTLHPGETIYTFWDYFRNAYARNAGLRIDHLLLSPALADRLAGAQVDMHVR
GWEKTSDHAPVWIELAPKPARHRKAPSATQNKAKP
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
gtgatcatcgcgacctacaatgtgaacggcgtcaacggccggctgccggtgctgctgcgc
tggctggccgaacgccagcccgacatcgtcgttctgcaggagctgaaggcgccccaggag
aaattcccgctgagcgcgatccgcgatcttggctacgatgcgatctggcacgggcagaaa
agctggaacggcgtcgcgatcctcagccgcgtcggcgagattcacgaaacacggcgcggc
ctgcccggcgatcccgacgacagccacagccgctacatcgaggccgcggtcaacggcatc
ctcgtcggcggactctatctccccaacggcaatccgcggcccggacccaagttcgactat
aagcttcgatggttcgaccggctggtcgaccatgccgcccgcctgctcgaaaccggcctg
ccggtgatgctggcgggcgacttcaacgtgatgccgaccgagctggatgtctacaaaccc
gagcgcttgctcgacgatgcgttgttcgcccccgaggtgcgcgcggcctatttccggctg
ctcggccagggctggaccgacgcgctgcgcacgctccatcccggcgagaccatctacacc
ttctgggactatttccggaacgcctatgcccgcaatgccgggctacgcatcgaccatctg
ctcctcagcccggcgctcgccgaccgcctcgccggcgctcaggtcgatatgcatgtgcgc
ggttgggagaagacaagcgatcatgcgccggtctggatcgagcttgccccgaaaccggca
cggcaccgcaaagccccatcggcaacgcagaacaaagcaaagccatga
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