Sphingomonas sanxanigenens: NX02_13155
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Entry
NX02_13155 CDS
T03929
Name
(GenBank) hypothetical protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ssan
Sphingomonas sanxanigenens
Brite
KEGG Orthology (KO) [BR:
ssan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssan03016
]
NX02_13155
Enzymes [BR:
ssan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
NX02_13155
Transfer RNA biogenesis [BR:
ssan03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
NX02_13155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AHE54329
UniProt:
W0A8S8
LinkDB
All DBs
Position
2715726..2716196
Genome browser
AA seq
156 aa
AA seq
DB search
MGGVPGARWQDDDQLHITLRFIGEVDRHRAEDIATALGSVSALPFELALDGVGQFDRRGV
VDTLWVGVRPHDQVAALHRKVDQAVQRAGMPPEGRAYIPHITVARFGRTCGAIDGFVVNA
AAVMGLRFTVEHFMLFESTIGSDGARYDAIDRYHLR
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcgtccccggcgcgcgctggcaggatgacgaccagttgcacatcaccttgcgc
ttcatcggcgaggtcgatcggcaccgcgcagaggatatcgcgaccgcgctgggttcggtt
tccgcccttcccttcgagctcgcgctcgacggcgtcggccagttcgaccggcgcggcgtg
gtggatacgttgtgggtgggcgtgcgcccgcacgatcaggtcgcggcgcttcaccgcaag
gtggatcaggccgtacagcgcgccggtatgcctcccgagggacgcgcctatatcccgcac
atcacggtcgcccgcttcggacggacctgcggggcgatcgacggcttcgtcgtcaatgcc
gcggcggtgatggggctgcgcttcaccgtcgagcatttcatgctgtttgaaagcacgatc
ggcagcgacggcgcgcgctacgatgcgatcgaccgctaccacctgcgttga
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