KEGG   Serratia sarumanii: SSARUM_000324
Entry
SSARUM_000324     CDS       T10280                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
ssar  Serratia sarumanii
Pathway
ssar02024  Quorum sensing
ssar03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ssar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SSARUM_000324 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SSARUM_000324 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssar03019]
    SSARUM_000324 (hfq)
   03036 Chromosome and associated proteins [BR:ssar03036]
    SSARUM_000324 (hfq)
Messenger RNA biogenesis [BR:ssar03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     SSARUM_000324 (hfq)
Chromosome and associated proteins [BR:ssar03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    SSARUM_000324 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: WGZ63264
LinkDB
Position
359104..359412
AA seq 102 aa
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSNNPSGGSSNYHHGNNPSAQQQPQQESDDAE
NT seq 309 nt   +upstreamnt  +downstreamnt
atggctaaggggcaatctttgcaagatccgttcctgaacgcattgcgtcgtgaacgtgtt
ccggtttctatttatttggtgaatggtattaagctgcaaggccagattgagtcttttgac
cagtttgtcatcctgttgaagaacacggttagccagatggtgtacaagcacgctatctct
accgttgtcccgtctcgcccggtctcgcatcacagcaacaacccgagcggcggttcaagc
aactatcaccatggcaacaatccgtctgcgcagcaacagccgcagcaggaaagcgatgac
gctgaataa

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