Sus scrofa (pig): 100513410
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Entry
100513410 CDS
T01009
Symbol
SS18
Name
(RefSeq) protein SSXT
KO
K15623
protein SSXT
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03082
ATP-dependent chromatin remodeling
ssc05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100513410 (SS18)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100513410 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100513410 (SS18)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100513410 (SS18)
GBAF(ncBAF) complex
100513410 (SS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
100513410
NCBI-ProteinID:
NP_001231733
Ensembl:
ENSSSCG00000003716
UniProt:
A0A4X1VMY8
A0A286ZM63
LinkDB
All DBs
Position
6:complement(110711438..110789805)
Genome browser
AA seq
387 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQ
NQMNGQMPGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMT
MSQGQPMGNYGPRPNMNMQPNQGPMMHQHPPSQQYNMPHGGGQHYQGQQPPMGMMGQVNQ
GNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGNSQYGQ
QQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYR
PTQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggctttcgcggccccgaggcagcgaggcaaaggggagatcactcccgctgcg
attcagaagatgttggatgaaaataaccatcttattcagtgtataatggactatcagaat
aaaggaaagacttcagagtgttctcagtaccagcagatgttgcatacaaacttggtctac
cttgctacaatagcagattctaatcaaaatatgcagtctcttttaccagcaccacccaca
caaaatatgcctatgggtcctggagggatgaatcagagcggccctcccccacccccacgc
tctcacaacatgccttcagatggaatggtaggtgggggtcctcctgcaccacacatgcag
aaccagatgaacggccagatgcctgggcctaaccatatgcctatgcagggacctggaccc
aatcaactcaatatgacaaacagttccatgaacatgccttcaagtagccatggatccatg
ggaggttacaaccattccgtgccatcatcacagagcatgccagtacagaaccagatgaca
atgagtcaagggcagccaatgggaaactatggcccaagaccaaatatgaatatgcaacca
aaccaagggccaatgatgcatcagcatcctccctctcaacagtacaatatgccacatgga
ggtggacagcattaccaaggccagcagccacctatgggaatgatgggtcaagttaaccaa
ggcaatcatatgatgggtcagagacagattcctccctatagaccacctcaacagggccca
ccacagcagtactcaggccaggaagactattatggggaccagtacagtcatggtggacaa
ggtcctccagaaggcatgaaccagcaatattaccctgatggaaactcacagtacggccaa
cagcaggatgcttaccaaggaccacctccccagcagggctatccaccccagcagcagcag
tacccagggcagcagggctacccaggacagcagcagggctacggtccttcacagggtggt
ccaggtcctcagtatcctaactatccacagggacaaggtcagcagtatgggggttacaga
ccaacacagcctggaccaccacagccaccacagcagaggccttacggatatgaccaggga
cagtatgggaattaccagcagtga
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integrated database retrieval system
