KEGG   Sus scrofa (pig): 100514612
Entry
100514612         CDS       T01009                                 
Symbol
BRAF
Name
(RefSeq) serine/threonine-protein kinase B-raf isoform X6
  KO
K04365  B-Raf proto-oncogene serine/threonine-protein kinase [EC:2.7.11.1]
Organism
ssc  Sus scrofa (pig)
Pathway
ssc01521  EGFR tyrosine kinase inhibitor resistance
ssc01522  Endocrine resistance
ssc04010  MAPK signaling pathway
ssc04012  ErbB signaling pathway
ssc04015  Rap1 signaling pathway
ssc04024  cAMP signaling pathway
ssc04062  Chemokine signaling pathway
ssc04068  FoxO signaling pathway
ssc04150  mTOR signaling pathway
ssc04270  Vascular smooth muscle contraction
ssc04510  Focal adhesion
ssc04650  Natural killer cell mediated cytotoxicity
ssc04720  Long-term potentiation
ssc04722  Neurotrophin signaling pathway
ssc04726  Serotonergic synapse
ssc04730  Long-term depression
ssc04810  Regulation of actin cytoskeleton
ssc04910  Insulin signaling pathway
ssc04914  Progesterone-mediated oocyte maturation
ssc04928  Parathyroid hormone synthesis, secretion and action
ssc04934  Cushing syndrome
ssc05010  Alzheimer disease
ssc05022  Pathways of neurodegeneration - multiple diseases
ssc05034  Alcoholism
ssc05160  Hepatitis C
ssc05161  Hepatitis B
ssc05200  Pathways in cancer
ssc05205  Proteoglycans in cancer
ssc05208  Chemical carcinogenesis - reactive oxygen species
ssc05210  Colorectal cancer
ssc05211  Renal cell carcinoma
ssc05212  Pancreatic cancer
ssc05213  Endometrial cancer
ssc05214  Glioma
ssc05215  Prostate cancer
ssc05216  Thyroid cancer
ssc05218  Melanoma
ssc05219  Bladder cancer
ssc05220  Chronic myeloid leukemia
ssc05221  Acute myeloid leukemia
ssc05223  Non-small cell lung cancer
ssc05224  Breast cancer
ssc05225  Hepatocellular carcinoma
ssc05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    100514612 (BRAF)
   04012 ErbB signaling pathway
    100514612 (BRAF)
   04015 Rap1 signaling pathway
    100514612 (BRAF)
   04068 FoxO signaling pathway
    100514612 (BRAF)
   04024 cAMP signaling pathway
    100514612 (BRAF)
   04150 mTOR signaling pathway
    100514612 (BRAF)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    100514612 (BRAF)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    100514612 (BRAF)
 09150 Organismal Systems
  09151 Immune system
   04650 Natural killer cell mediated cytotoxicity
    100514612 (BRAF)
   04062 Chemokine signaling pathway
    100514612 (BRAF)
  09152 Endocrine system
   04910 Insulin signaling pathway
    100514612 (BRAF)
   04914 Progesterone-mediated oocyte maturation
    100514612 (BRAF)
   04928 Parathyroid hormone synthesis, secretion and action
    100514612 (BRAF)
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    100514612 (BRAF)
  09156 Nervous system
   04726 Serotonergic synapse
    100514612 (BRAF)
   04720 Long-term potentiation
    100514612 (BRAF)
   04730 Long-term depression
    100514612 (BRAF)
   04722 Neurotrophin signaling pathway
    100514612 (BRAF)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100514612 (BRAF)
   05205 Proteoglycans in cancer
    100514612 (BRAF)
   05208 Chemical carcinogenesis - reactive oxygen species
    100514612 (BRAF)
  09162 Cancer: specific types
   05210 Colorectal cancer
    100514612 (BRAF)
   05212 Pancreatic cancer
    100514612 (BRAF)
   05225 Hepatocellular carcinoma
    100514612 (BRAF)
   05226 Gastric cancer
    100514612 (BRAF)
   05214 Glioma
    100514612 (BRAF)
   05216 Thyroid cancer
    100514612 (BRAF)
   05221 Acute myeloid leukemia
    100514612 (BRAF)
   05220 Chronic myeloid leukemia
    100514612 (BRAF)
   05218 Melanoma
    100514612 (BRAF)
   05211 Renal cell carcinoma
    100514612 (BRAF)
   05219 Bladder cancer
    100514612 (BRAF)
   05215 Prostate cancer
    100514612 (BRAF)
   05213 Endometrial cancer
    100514612 (BRAF)
   05224 Breast cancer
    100514612 (BRAF)
   05223 Non-small cell lung cancer
    100514612 (BRAF)
  09172 Infectious disease: viral
   05161 Hepatitis B
    100514612 (BRAF)
   05160 Hepatitis C
    100514612 (BRAF)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100514612 (BRAF)
   05022 Pathways of neurodegeneration - multiple diseases
    100514612 (BRAF)
  09165 Substance dependence
   05034 Alcoholism
    100514612 (BRAF)
  09167 Endocrine and metabolic disease
   04934 Cushing syndrome
    100514612 (BRAF)
  09176 Drug resistance: antineoplastic
   01521 EGFR tyrosine kinase inhibitor resistance
    100514612 (BRAF)
   01522 Endocrine resistance
    100514612 (BRAF)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:ssc01001]
    100514612 (BRAF)
Enzymes [BR:ssc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     100514612 (BRAF)
Protein kinases [BR:ssc01001]
 Serine/threonine kinases: TKL group
  RAF family [OT]
   100514612 (BRAF)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Pkinase RBD C1_1 Kinase-like zf-RING-like ABC1 C1_2 Pkinase_fungal Kdo
Other DBs
NCBI-GeneID: 100514612
NCBI-ProteinID: XP_005654324
Ensembl: ENSSSCG00000016494
LinkDB
Position
18:8957963..9132558
AA seq 727 aa
MIKLTQEHIEALLDKFGGEHNPPSIYLEAYEEYTSKLDALQQREQQLLESLGNGTDFSVS
SSASTDTVTSSSSSSLSVLPSSLSVFQNPTDASRSNPKSPQKPIVRVFLPNKQRTVVPAR
CGVTVRDSLKKALMMRGLIPECCAVYRIQDGEKKPIGWDTDISWLTGEELHVEVLENVPL
TTHNFVRKTFFTLAFCDFCRKLLFQGFRCQTCGYKFHQRCSTEVPLMCVNYDQLDLLFVS
KFFEHHPIPQEEASLAETALTSGSSPSAPPSDSLGPQILTSPSPSKSIPIPQPFRPADED
HRNQFGQRDRSSSAPNVHINTIEPVNIDEKFPEVELQDQRDLIRDQGFRSDGGSTTGLSA
TPPASLPGSLTNVKALQKSPGPQRERKSSSSSEDRNRMKTLGRRDSSDDWEIPDGQITVG
QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS
TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSN
NIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVY
AFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKK
RDERPLFPQILASIELLARSLPKIHRSASEPSLNRAGFQTEDFSLYACASPKTPIQAGGY
GEFAAFK
NT seq 2184 nt   +upstreamnt  +downstreamnt
atgattaaattgacacaagaacatatagaggccctattggacaaatttggtggggagcat
aatccaccttcaatatatctggaggcctatgaagaatacaccagcaagctagatgccctc
cagcaaagagaacagcagttattggaatccctggggaatggaactgatttttctgtttct
agttctgcatcaacggacaccgttacatcttcttcctcttctagcctttctgtgctgcct
tcatctctttcagtttttcaaaatcccacagatgcatcacggagcaaccccaagtcacca
caaaaacctattgttagagtcttcctgcccaataaacagaggacagtggtacctgcaagg
tgtggcgttacagtccgggacagtctaaagaaagcgctgatgatgagaggtctaatccca
gagtgctgcgctgtttacagaattcaggatggagagaagaaaccaattggctgggacact
gatatttcctggcttacaggagaggaattgcatgtagaagtgttggagaatgttccactt
acaacccacaactttgtacggaaaacttttttcaccttagcattttgtgacttctgtcga
aagctgcttttccaggggttccgctgtcaaacatgtggttataaatttcaccagcgttgt
agtacagaggttccactgatgtgtgttaattatgatcaacttgatttgctgtttgtctcc
aagttctttgaacaccacccaataccacaggaggaggcctccttagcagagactgccctt
acgtctggatcatccccttctgcacccccctccgattcccttgggccccaaattctcacc
agtccgtctccttcaaaatccattccaatcccacagcctttccgaccagcagatgaagat
catcgaaatcagtttggacagagagaccggtcctcatcagctccaaatgtgcatataaac
acaatagaacccgtcaatattgatgaaaaattcccagaagtcgaattacaggatcaaagg
gacttgattagagaccaagggtttcgtagtgatggaggatccaccacaggtttgtctgcc
acgccccctgcctcattacctggctcactcactaatgtgaaagcattacagaaatctcca
ggacctcagcgagagaggaagtcatcttcatcctcagaagacaggaatcgaatgaaaaca
cttggtagacgggattcaagtgatgattgggagattcctgatgggcagatcacagtggga
caaagaattggatctgggtcgtttgggacagtctacaagggaaagtggcatggtgatgtg
gcagtgaaaatgttgaatgtgacagcacccacacctcagcagttacaggccttcaaaaat
gaagtaggagtactcaggaaaactcgacatgtgaatatcctactcttcatgggttattca
acaaagccacaactggctattgttacccagtggtgtgagggctccagcttatatcatcat
ctccacatcattgagaccaaattcgagatgatcaaacttatagatattgcacggcagact
gcacagggcatggattacttacacgccaagtcaatcatccacagagacctcaagagtaat
aatatttttcttcatgaagacctcacagtaaaaataggtgattttggtctagccacagtg
aaatctcgatggagtgggtcccatcaatttgaacagttgtctggatccattttgtggatg
gcgccagaagtaatcagaatgcaagacaaaaacccgtatagctttcagtcagacgtatat
gcttttggtattgttctgtatgaattgatgactggacagttaccttattcaaacatcaac
aacagggaccagataatttttatggtgggacgaggatatctatctccagatctcagtaag
gtacggagtaactgtccaaaggccatgaagagattaatggcagagtgcctaaaaaagaag
agagatgagagaccactctttccccaaattctcgcctctattgagctgttggcccgctca
ttgccaaaaattcaccgcagtgcatcagaaccctccttgaatcgggctggcttccaaaca
gaggattttagtctatatgcttgtgcttctccaaaaacacccatccaggcagggggatat
ggagaatttgcagccttcaagtag

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