Sus scrofa (pig): 100516858
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Entry
100516858 CDS
T01009
Symbol
FKRP
Name
(RefSeq) fukutin-related protein isoform X1
KO
K19873
fukutin-related protein [EC:2.7.8.-]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc00515
Mannose type O-glycan biosynthesis
ssc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
100516858 (FKRP)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ssc01003
]
100516858 (FKRP)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100516858 (FKRP)
Glycosyltransferases [BR:
ssc01003
]
Glycan extension
O-Glycan
100516858 (FKRP)
Membrane trafficking [BR:
ssc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
100516858 (FKRP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FKRP_N
LicD
Motif
Other DBs
NCBI-GeneID:
100516858
NCBI-ProteinID:
XP_020950277
Ensembl:
ENSSSCG00000003103
LinkDB
All DBs
Position
6:52627466..52639255
Genome browser
AA seq
547 aa
AA seq
DB search
MPQACPPPPRAQKKGWERKARLRMGRGASDNQLLFPPAQDTPEAQLGPNFSPMRLTRCQA
ALAAAITLNLLVLFYVSWLQHQPRNSRARGSRRGSTSGPRVTVLVREFEAFDNAVPELVD
SFLQQDPAQPVVVASDTLPYPPLALPRISNVRLALLQPALDRPAAASRPETYVATEFVAL
VPDGARAEAPGQLERMVEVLRAGGARLVAAPVASANPARCLALNVSLREWTARYGPAPSA
PRCDAVDGDAVVLLRTRDLFNLSAPLARPVGTSLFLQTALRGWTVQLLDAPFAAAHQPPL
ATAHARWKAEREGRARRAALLQALGIRLVSWEGGRLEWFGCNKETPRCFGTVVGDTPAYL
YEGRWTPPCCLRALRETARYVVGVLEAAGVRYWLEGGSLLGAARHGDIIPWDYDVDLGIY
LEDVGNCEQLRGAEAGSVVDERGFVWEKAVEGDFFRVQYSESNHLHVDLWPFYPRNGVMT
KDTWLDHRQDVEFPEHFLQPLVPLPFAGFVAQAPNNYRRFLELKFGPGVIENPEYPNPAL
LSLAASS
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgccacaggcgtgccccccccccccgcgcgcccaaaaaaagggctgggagaggaaggca
aggctgaggatgggtaggggagcttctgacaaccagcttttgttcccccctgcccaggat
accccggaagcccagctagggcctaacttcagccccatgcggctcacccgctgccaggct
gctctggcagccgccatcacgctcaacctcctggtcctgttttatgtttcgtggctgcag
caccagcccaggaactcccgggccaggggctcccgccgtggatctacctccggtccgcgc
gtcaccgtcctggtgcgggagttcgaggcctttgacaacgcggtgccagagctagtggat
tccttcctgcagcaggacccagcccagcccgtggtggtggcttcggacacactcccctat
ccgcccctggccctgccgcgcatctccaacgttcgcctggcgctgctccagcctgccctg
gaccggcccgccgcagcctcgcgccccgagacctacgtggccaccgagttcgtggccctg
gtgcccgacggggcaagggccgaggcacccggccagctggagcgcatggtggaagtgctc
cgagccggaggcgcacgcctggtggccgctcccgtcgcttcggccaaccctgctcggtgc
ctggccctgaacgtcagcctgcgggagtggaccgcccgctatggcccagcgccctccgca
ccccgctgcgacgccgtggacggggacgccgtggttctcctgcgcacccgcgacctcttc
aacctgtcggcgcccctagcccggcccgtgggcaccagcctcttcctgcagaccgccctt
cgcggctggacggtgcagctgctggatgcacccttcgccgcggcccaccagcccccgcta
gccacagcccacgcgcgctggaaggcggagcgcgaggggcgagcgcggcgcgcggcgctg
ctccaggcgctgggcatccgcctggtgagctgggagggcgggcggctcgagtggtttgga
tgcaacaaggagaccccgcgctgcttcgggacggtggtgggcgacacgccagcctacctg
tacgaggggcgctggactcccccgtgctgcctgcgcgcgctgcgcgaaaccgcacgctac
gtggtgggtgtgctggaggcggccggcgtgcgctactggctggagggcggctcgctgctg
ggagcggcccgccacggggacatcatcccgtgggactacgacgtggacctgggcatctac
ctggaggacgtgggcaactgcgagcagctgcggggcgccgaggcaggctcagtggtggac
gagcgcggcttcgtgtgggagaaggcggtagagggtgacttcttccgcgtgcagtacagc
gagagcaaccacctgcacgtggacctgtggcccttctatccccgaaacggggtcatgacc
aaggacacgtggctggaccaccggcaggatgtcgagttccccgaacacttcctgcagcct
ctcgtgcccctgccctttgccggttttgtggcgcaggcgcctaacaactaccgccgcttc
cttgagctcaagttcggccccggggtcatcgagaaccctgagtaccccaacccggcactc
ctgagtttggcagcaagcagctga
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