Sus scrofa (pig): 100520896
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Entry
100520896 CDS
T01009
Symbol
ETF1
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1 isoform X1
KO
K03265
peptide chain release factor subunit 1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100520896 (ETF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100520896 (ETF1)
03012 Translation factors [BR:
ssc03012
]
100520896 (ETF1)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
100520896 (ETF1)
Translation factors [BR:
ssc03012
]
Eukaryotic type
Release factors
100520896 (ETF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
100520896
NCBI-ProteinID:
XP_003124023
Ensembl:
ENSSSCG00000014337
UniProt:
A0A8D0HZG3
F2Z505
LinkDB
All DBs
Position
2:complement(140471931..140504381)
Genome browser
AA seq
437 aa
AA seq
DB search
MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSD
MFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDK
ETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQ
GMEYQGGDDEFFDLDDY
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaccccagtgctgccgacaggaacgtggagatctggaagatcaaaaagctc
attaagagcttggaggcggcccgcggcaatggcacaagcatgatatcactgatcattcct
cccaaagaccagatttcacgagtggcaaaaatgttagcagatgagtttggaactgcatct
aacattaagtcacgagtaaaccgcctttcagtcctgggagccattacatctgtacaacaa
agactcaaactttataacaaagtacctccaaatggcctggttgtttactgtggtacaatt
gtaacagaagaaggaaaggaaaagaaagtcaacattgactttgaacctttcaaaccaatt
aatacatcattgtatttgtgtgacaacaaattccatacagaggctcttacagcactactt
tcagatgatagcaagtttggcttcattgtaatagatggtagtggtgcactttttggcaca
ctccaaggaaatacaagagaagtcctgcacaaattcactgtggatctcccaaagaaacat
ggtagaggaggtcagtcagccttgcgctttgcccgcttaagaatggaaaagcgacataac
tatgttcggaaagtagctgagactgctgtgcagctgtttatttctggggacaaagtgaat
gtggctggtctcgttttagctggatcagctgactttaaaactgaactaagtcaatctgat
atgtttgatcagaggttgcaatcaaaagttttaaaattagttgatatatcctatggtggt
gaaaacggattcaaccaagctattgagttatctactgaagtcctctccaacgtgaagttc
attcaagagaagaaattaatagggcgatacttcgatgaaatcagccaagacacgggcaag
tactgttttggagttgaagatacactaaaggctttagaaatgggagctgtagagattcta
atagtctatgaaaacctggatataatgagatatgttcttcattgccaaggcacagaagag
gagaaaattctctatctaactccagaacaagagaaggataaatctcattttacagacaaa
gagacaggacaagaacatgagctgattgagagcatgcccctgctggaatggtttgctaac
aattataaaaaatttggagctacgttggaaattgtcacagataagtcacaagaaggatcc
caatttgtgaaaggatttggtggaattggaggtatcttgcggtaccgagtagatttccag
ggaatggaataccaaggaggagatgatgaattttttgaccttgatgactactag
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