Sus scrofa (pig): 100524569
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Entry
100524569 CDS
T01009
Symbol
JARID2
Name
(RefSeq) protein Jumonji isoform X5
KO
K11478
protein Jumonji
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03083
Polycomb repressive complex
ssc04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100524569 (JARID2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100524569 (JARID2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100524569 (JARID2)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
100524569 (JARID2)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
100524569 (JARID2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
100524569
NCBI-ProteinID:
XP_005665649
Ensembl:
ENSSSCG00000001061
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All DBs
Position
7:11358243..11601715
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AA seq
1207 aa
AA seq
DB search
MAAPRVCQVQFLVAYLEEPGIEGLLGNGQSKGLGPASEQSENEKDDASQVSSTSNDVSSS
DFEEGPSRKRPRLQAQRKFAQSQPNSPSTTPVKIVEPLLPPPATQISDLSKRKPKTEDFL
TFLCLRGSPALPNSMVYFGSSQDEEDVEEEDDETEDVKTAANNASSSCQSTPRKGKTHKH
VHNGHVFNGSSRSSREKEPVQKHKSKEATPAKEKHSDPRADGRREQASASHPPAAPSTGS
SAKGLAANHHHPPLHRSAQDLRKQVSKVNGVTRMSSLGTSATSAKKMREVRPSPSKTVKY
TATVTKGTVTYTKAKRELVKETKPNHHKPSSAVNHTISGKTESSNAKTRKQVLSLGGASK
STGHAVNGLKVSGRLNPKSCTKEVGGRQLREGLRNSKRRLEEAPPADKPQSPPKKMKGAA
GAAEGPGRKPASAQAPAPAPAPAPAEKAPPGGHVKKEVPERSLERNRPKRAAAGKGPPGR
QAHSKPDAPCEHRSTSQSEPLPRPHEAAAKAEKGAGRAGWAAMDEIPVLRPSAKEFHDPL
VYIESVRPQVEKYGMCRVIPPPDWRPECKLNDEMRFVTQIQHIHKLGRRWGPNVQRLACI
KKHLRSQGITMDELPLIGGCELDLACFFRLINEMGGMQQVTDLKKWNKLADMLRIPKTAQ
DRLAKLQEAYCQYLLSYDSLSPEEHRRLEKEVLMEKESLERRKGPLEGHTEQDYNRFHPL
PRFEPKNGLINGVAHRNGFRSKLKEVGPAQLKTGRRRLFAQEKEVAKEEEEDKGILSDFH
KCIYKGRSVSLTTFYRTARNIMNMCFSKEPAPAEIEQEYWRLVEEKDCHVAVHCGKVDTN
THGSGFPVGKSEPFSRHGWNLTVLPNNTGSILRHLGAVPGVTIPWLNIGMVFSTSCWSRD
QNHLPYIDYLHTGADCIWYCIPAEEENKLEDVVHTLLQANGTPGLQMLESNVMISPEVLC
REGVKVHRAVQQSGQFVVCFPGSFVSKVCCGYSVSETVHFATTQWTSMGFETAKEMKRRH
IAKPFSMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRQLFEAGLHSSARYG
SHDGGSAAPDGKKKPRKWLQLETSERRCQVCQHLCYLSMVVQENENVVFCLECALRHVEK
QKSCRGLKLMYRYDEEQIISLVNQICGKVSGKNGSIENCLGKPTPKRGPRKRATVDVPPS
RLAPSSS
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccacgggtctgtcaggtccagtttttggtggcttatcttgaggaacctggg
atagaagggctccttggtaatggccagtctaagggattaggaccagcatcagaacagtca
gagaatgagaaggacgatgcatcccaagtgtcctcgactagcaacgatgttagttcttca
gattttgaagaagggccgtcgaggaaaaggcccaggctgcaagcacaaaggaagttcgct
caatcccagccgaatagtcccagcacaactccagtaaagatagtggagccattgctaccc
cctccagctactcaaatctctgacctctctaaaaggaagcctaagacagaagattttctt
acctttctctgccttcgaggttctcctgcgctgcccaacagcatggtatatttcggaagc
tctcaggacgaggaggatgtcgaggaggaagatgatgagacagaagacgtcaaaacagcc
gccaacaatgcttcatcttcatgccagtcaacccccaggaaaggaaaaacccacaagcat
gttcacaacggacatgttttcaatggttccagcaggtcatcacgggagaaggaacctgtt
cagaaacacaaaagcaaagaggccactcccgcgaaggagaagcacagcgatccccgggcc
gacggccggagggagcaggcttcggcgagccaccccccagcggccccctccacgggctcc
tcggccaaggggctcgccgctaaccaccaccacccgcctctgcatcggtcggctcaggac
ttacggaagcaggtttctaaggtcaacggagtcactcgaatgtcatctctgggtacaagt
gcaaccagtgccaaaaagatgcgcgaagtcagaccttcaccgtccaaaactgtgaagtac
actgcaacggtgacgaaggggactgtcacatacaccaaagccaagagagaactggtcaag
gaaaccaaacccaatcaccacaagcccagttcagctgtcaaccacacaatctcagggaaa
actgaaagtagcaatgcaaaaacccgcaaacaggtgctatccctcgggggggcgtccaag
tccaccgggcacgccgtcaatggcctcaaggtcagtggcaggttgaacccaaagtcatgc
actaaggaggtgggggggcggcagctgcgggaggggctgcggaactccaagcgcaggctg
gaagaggcgcccccggccgacaagccgcagtcacccccgaagaagatgaagggggcggcg
ggtgctgccgagggccccggcaggaagccggcctcagcccaggccccggccccagccccg
gccccagcccctgccgagaaggcgccgcctggcggccacgtgaagaaggaggtgcccgag
cggagcctggagaggaaccggccgaagcgggcagcggccggcaagggcccgccgggcaga
caagcacacagcaagccggacgccccctgtgaacatcgttctacctcgcaatcggagccc
ctgccccggccgcacgaggcggcggccaaggccgagaagggggccggccgggccgggtgg
gcggccatggacgagatccccgtactgcggccgtcggccaaggagttccacgacccgctc
gtctacatcgagtcggtgcgccctcaggtggagaagtacggcatgtgcagggtgatcccg
cccccggactggcggcccgagtgcaagctcaacgacgagatgcgcttcgtcacgcagatc
cagcacatccacaagctgggccggcgctggggccccaacgtgcagcggctggcctgcatc
aagaagcacctcagatctcagggcatcaccatggacgagctcccgctcataggaggctgt
gagctcgacctggcctgctttttccggctgattaacgagatgggcggcatgcagcaagtg
actgacctcaaaaagtggaacaaactagcagacatgctgcgcatccccaaaaccgcccag
gaccggctggccaagctccaggaggcctactgccagtacctgctctcctacgactccctg
tcccccgaggagcaccggcgcctggagaaggaggtgctcatggagaaggagagcctggag
cggcgcaaggggcccctggagggccacacggagcaggactacaaccgcttccacccgctg
ccccgcttcgagcccaagaacgggctcatcaacggcgtggcccacaggaacggcttccgc
agcaagctgaaggaggtgggccccgcgcagctcaagacgggccggcggagactctttgct
caggaaaaggaggtggcgaaggaggaggaggaggacaaaggcatcctcagcgacttccac
aagtgcatatacaagggaagatctgtttctttaacgactttttaccgaacagctagaaat
atcatgaacatgtgcttcagcaaggagccggcccccgcggagatcgagcaagagtactgg
aggcttgtggaggagaaggactgccacgtggctgtgcactgcggcaaagtggacaccaac
acgcacggcagcggcttcccggtggggaaatcagagcccttttcaagacacggatggaac
ctcaccgtcctccccaataacacaggctccatcctgcgtcacctcggtgctgtgcctgga
gtgacaattccctggctgaacatcggcatggtcttttctacctcatgctggtctcgagac
caaaaccaccttccctacatcgactacttacacactggtgctgactgcatttggtattgc
attcctgctgaggaggagaacaagctcgaggacgtggtgcacaccctgctccaagccaac
ggcacgccgggcctgcagatgctcgagagcaacgtcatgatctccccggaggtgctgtgc
agagagggggtcaaggtgcacagggcggtgcagcagagtggccagttcgttgtctgcttc
ccggggtccttcgtgtccaaagtgtgctgcggctacagcgtctcagagaccgtgcacttc
gccaccacccagtggacgagtatgggcttcgagacggccaaggaaatgaagcgtcgccat
atagccaagccattctccatggagaagttgctctaccagatcgcacaagcggaagcgaaa
aaggaaaatggtcccactctcagtaccatctcggcccttctggacgagctcagggatacg
gagctgcggcagcgccggcagctgttcgaggctggcctccactcctccgcccgctacggc
agccacgacggcggcagcgccgcgcccgacggcaagaagaagcctcggaagtggctgcag
ctggagacctcggagcgacggtgtcaggtgtgccagcacctgtgctacctgtccatggtc
gtgcaggagaacgagaacgtggtcttctgcctggagtgcgccctgcgccacgtggagaag
cagaagtcctgccggggcctgaagctgatgtaccgttacgacgaggaacaaatcatcagc
ctggtcaatcagatctgtggcaaagtatctggtaaaaacggcagcattgagaactgtctc
ggtaaacccacaccaaaaagagggccccgcaagagagccacggtggacgtgccgccctcc
cggctcgcaccctcctcttcgtga
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integrated database retrieval system