Sus scrofa (pig): 100525504
Help
Entry
100525504 CDS
T01009
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03022
Basal transcription factors
ssc03420
Nucleotide excision repair
ssc05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100525504 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
100525504 (GTF2H1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100525504 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssc03021
]
100525504 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
ssc03400
]
100525504 (GTF2H1)
Transcription machinery [BR:
ssc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100525504 (GTF2H1)
DNA repair and recombination proteins [BR:
ssc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100525504 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
100525504
NCBI-ProteinID:
XP_013849960
Ensembl:
ENSSSCG00000013367
UniProt:
A0A4X1T9S3
LinkDB
All DBs
Position
2:complement(40857720..40900591)
Genome browser
AA seq
548 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLNVNATESSSTSNHKQDVGISAAFLADVRPQTDG
CNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK
DLFAECAKIDEKGLKTMVSLGVKNPLLDLTALEDKPLDEGYGISSVPSTSNSKSIRENSN
AAIIKRFNHHSAMVLAAGLRKQEAQNEHNGEPSSIDGNSGDVDCFQPAVKRAKLQESIEY
EDLGKNNSIKTIALNLKKSDRYYHGPTPIQSLQYATSQDIINSFQSIRQEMEAYTPRLTQ
VLSSSAASSTITALSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP
VNTPFLEEKVVKMKSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKLHTWQ
SRRLMKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttcatctgaagaagttttgctgattgtaaagaaggtgcgacaaaagaagcaa
gatggagctctatacctcatggcagaaagaattgcttgggcacctgaaggcaaagataga
tttaccatcagccatatgtatgcggacattaaatgccagaaaatcagtccagaaggaaaa
gccaaaattcagcttcagctggtcctgcatgcaggggacacaactaacttccatttttcc
aatgaaagcacagcagtgaaagagcgagatgcagtgaaagaccttcttcagcagttgctg
ccgaaattcaagaggaaagcaaataaagaactagaagagaaaaacagaatgctgcaagaa
gatcctgttttgtttcagctttataaagaccttgttgtgagtcaagtgatcagtgctgag
gaattctgggccaatcgtttaaatgtgaatgcaacagagagttcttctacatctaatcat
aagcaggatgttggcatttctgcagcatttctggctgatgtccggccccaaacagatgga
tgtaatggtctgaggtacaatttaacatctgatatcattgagtccatatttaggacctat
ccagcagtgaaaatgaaatatgcagaaaatgttccccacaacatgacagagaaggaattc
tggacgcgtttttttcagtcccattattttcatagggaccggctgaatacaggatcaaag
gacctctttgcagaatgtgccaaaatagatgaaaaagggttaaaaacaatggtttcttta
ggcgtgaaaaacccacttcttgatttgacagctttggaagataaaccattagatgagggc
tatggcatttcctctgtgccatctacctctaattctaaatccataagggaaaatagcaat
gctgcgatcatcaagagatttaaccatcacagtgccatggtcctggcagcaggtctcagg
aaacaagaagcacaaaatgaacacaatggtgagcccagcagcattgatggaaattctgga
gatgtagactgctttcagccagcagtcaaaagggcgaagttacaggagtctattgaatac
gaagacttggggaaaaataattccataaaaacaattgcactaaacctcaagaagtcagat
aggtattatcatggtccaactccaatccagtcgctacagtatgcaacaagtcaggatatt
attaattcttttcaaagtattagacaagaaatggaagcatatacacccagattaactcag
gttctctcaagtagcgctgccagtagtaccatcacagcactgtcacctggaggagcactt
atgcagggggggacacagcaagccataaaccagatggtgccgaatgatattcagtccgaa
ttgaaacacctgtatgtggctgttggagagcttctccggcacttctggtcctgctttcct
gttaatacgccattcctagaagaaaaggtagtgaaaatgaaaagtaatttggaacgattc
caagttacaaagctctgcccattccaagaaaaaatccggagacagtatttaagcacaaat
ttggtaagtcatatagaagagatgctccagacagcctacaacaagctccatacatggcag
tcacggcgtctaatgaagaaaacgtga
DBGET
integrated database retrieval system
