KEGG   Sporothrix schenckii: SPSK_00237
Entry
SPSK_00237        CDS       T05555                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
ssck  Sporothrix schenckii
Pathway
ssck03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ssck00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SPSK_00237
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ssck03041]
    SPSK_00237
   04121 Ubiquitin system [BR:ssck04121]
    SPSK_00237
Spliceosome [BR:ssck03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    SPSK_00237
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    SPSK_00237
Ubiquitin system [BR:ssck04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    SPSK_00237
SSDB
Motif
Pfam: SART-1 HIND
Other DBs
NCBI-GeneID: 27662492
NCBI-ProteinID: XP_016586596
UniProt: A0A0F2M542
LinkDB
Position
Unknown
AA seq 720 aa
MDLATLEEANRLRESMGLKPLPIPGQEPQSRNSDEDDDDDDDNDDGEEDDPMATLEGRHA
AAFDNFKQVQDAQLAKRRREEKAAAVKRAREKAQRHALLEGKTLGDLDDEDGVDADGDAK
AWLRGQKKRQKKIGKVEEQQKASEAATAEEERRRRRRAAGASSEGEGDDDLPTGVKVGHD
MASLLDGDDQILTLKDATVLDNEDEGDELENLGLREEEQLQERLALKKKRLNYDPLNDDE
GSHTILGHYDEEIYGKKRKHFTLDPNAILGLGSGSKGATPGASNTGAAATNGQAAEQQHL
AIDDILSGMPSSDYLDASEIKMKKPKKKTSKTKKTRTRGGDDDEGLFPASAADNEGNSSG
AVDYAEMDLDDGIELAAKRRKRRAMDAEELFRDDDELQASLALQRREALKKRKRTRPEDV
AKQLREEPAAPAENGENGDDGDATPATGGLVIDETAEFINNLKRREDREDDAPRPRKQAL
ASSVTTMEESDYEDVAMKDGGADEEDARNEREGSSAAHHDNGGGLEEEKKISEGLGATLS
ILRGRGILDDEGGDDGVGASERNARMRAHQKFVTEKRVQLARLEDEARRKREHDRTSGPM
SRMSVREREEYARKQNAQREFQTSRMLQDMFNKSYTPNFNLEYVDEHGRELNQKEAFRAL
SHGFHGKTSGRGKTDKMLKKIEVEKRHMAEGILDASQNVGMSSATAQQLKKRKEAGIRLD
NT seq 2163 nt   +upstreamnt  +downstreamnt
atggatctcgcaacgctcgaagaggcaaaccgccttcgagagtctatgggcctcaagcct
ttgcccattccaggacaggagccacagtcgagaaacagcgatgaggatgacgacgatgat
gacgacaatgacgatggcgaagaagacgaccccatggcaacacttgagggccgccacgcg
gcagcctttgacaacttcaagcaggtgcaggatgcccagttggccaagcgccggcgcgaa
gagaaggcagctgccgtgaagcgtgcacgcgagaaagcacaacgacacgcacttctcgag
ggcaagacgctgggtgacctggatgatgaagacggtgtcgatgctgacggtgacgccaag
gcgtggctgcgcggacaaaaaaagcgccaaaagaaaattggcaaggttgaagagcagcaa
aaggccagcgaagctgcgacggccgaggaggaacggcggaggcgacggcgagctgcaggt
gcgtcgagcgagggcgagggcgatgacgaccttccgacaggtgtaaaggtgggacatgac
atggcgtcgctcctggacggcgacgaccaaatcctcacgctcaaggacgcgacagtattg
gacaacgaggatgagggcgatgagctggaaaaccttggtttacgcgaggaagagcaactt
caagagcgtctggcattgaagaaaaagcgtcttaattatgaccctctgaatgatgacgaa
ggctcacacacgatacttggccattacgacgaggagatctacggcaaaaagcgaaagcat
tttacgcttgacccaaatgcgatcctgggtctaggtagcgggagcaaaggtgctacaccg
ggcgcctccaacacaggcgcggccgctaccaatggccaggctgcagagcaacaacacctg
gctatcgatgacattctgtctggcatgccttcatctgactacctcgacgcgtctgaaata
aagatgaagaaaccaaagaagaagacgtccaagaccaaaaagacacgaacgcgaggtgga
gatgatgacgaaggcctctttccggcttccgccgccgacaatgaaggcaacagtagcggc
gctgtcgattatgcggagatggaccttgacgatgggatagagctagcggccaagaggcga
aagcgccgggccatggatgcagaggagcttttccgcgatgacgacgaactgcaagcctca
ctggccctgcaacgacgtgaagctctgaaaaaacggaagcgaactcgaccagaagacgtt
gccaaacaactacgagaggagcctgcagcgcctgcagaaaatggcgagaatggcgatgat
ggtgacgccacccctgcaactggcggccttgtcattgacgagacggctgaattcatcaac
aacttgaagcggcgagaggaccgtgaagatgatgccccacggcccagaaaacaagcccta
gcatcgtcagtgacaaccatggaagagagcgattacgaggatgttgcgatgaaggatggc
ggcgcggacgaagaagacgcacgcaatgaacgggagggcagcagtgcagcccaccacgac
aacggcggcggtcttgaggaggagaagaagattagtgaaggcttgggcgcgacgctgtcg
atcttacggggacgcggcattctagatgacgaaggcggggacgacggtgtgggtgcctcc
gagaggaacgcgcgcatgcgggcgcaccaaaagttcgtcacagaaaaacgggtacagctc
gcacggttggaagacgaagcacgtcgcaagcgcgagcatgaccggacgtccggccccatg
tcgcgtatgtctgtgcgtgagcgcgaagagtatgcccggaaacagaacgcacagcgggag
ttccagacgtcgcgcatgctgcaagacatgttcaacaagagctacacgccgaactttaac
ctagaatacgttgacgagcacggccgagagttgaaccagaaggaggctttccgagctctg
agtcacggatttcatggcaagaccagtggccgtggcaaaacggacaagatgttgaaaaag
attgaggttgagaagcgtcacatggcggagggcatcttggacgccagccagaatgtcggc
atgagctctgcaacggcacagcaactcaaaaagcgcaaggaggcgggcattcgactagac
taa

DBGET integrated database retrieval system