Scomber scombrus (Atlantic mackerel): 133976929
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Entry
133976929 CDS
T10651
Symbol
sdc4
Name
(RefSeq) syndecan-4
KO
K16338
syndecan 4
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04512
ECM-receptor interaction
ssco04514
Cell adhesion molecule (CAM) interaction
ssco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133976929 (sdc4)
04514 Cell adhesion molecule (CAM) interaction
133976929 (sdc4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133976929 (sdc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ssco00535
]
133976929 (sdc4)
Proteoglycans [BR:
ssco00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
133976929 (sdc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
133976929
NCBI-ProteinID:
XP_062271051
LinkDB
All DBs
Position
Unknown
AA seq
222 aa
AA seq
DB search
MLHLCCLVLLLSASVFSESVRETETWMPMKTTQTAALSTRDVESSGDSPNGSDFGFTDND
GEDDDEEDDDYYDSYDDDEDDEEYDGFSGSGDGAATETPERDIRPSVKPDSNSNKIPEME
RPARPTVNELDVVKNSNEIPLLRNEPEQENPPNVLMSHAGEGSIFNKTEVLAAVIAGCAV
GLMFAVLLTLFLIYRMKKKDEGSYDLGKKPIYKKAPTTEIYA
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacctctgctgcctcgtgctgctgttatcagcctctgtcttctctgagtcggtg
agggagacggagacgtggatgcccatgaagaccacacagacagccgccttgtcgacgcgc
gacgtcgagtcttcgggagactctccgaacggctccgacttcggcttcacggacaacgac
ggcgaagacgacgacgaggaggatgacgattactacgactcgtacgatgatgacgaggac
gacgaggagtacgacgggttctctggatctggggacggagcagcgactgagacgcctgaa
cgagacatccggccgtcggtgaagcccgactccaactccaacaagatccccgagatggag
cgtccggcgcggcccaccgtcaacgagctggacgtcgttaagaacagtaacgagatcccg
ctgctgcgtaacgagccggagcaggagaacccgcccaacgtgctcatgtctcacgccgga
gaaggaagcatcttcaacaagacggaggttctggcagctgtgatcgcgggctgcgccgtc
ggcctgatgttcgccgtcctgctcacgctcttcctcatctaccgcatgaagaagaaggac
gagggcagctacgatttgggaaagaagccgatctacaagaaggcgccaaccacagagatc
tacgcatag
DBGET
integrated database retrieval system
