Scomber scombrus (Atlantic mackerel): 133978144
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Entry
133978144 CDS
T10651
Symbol
slc6a11b
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
133978144 (slc6a11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssco02000
]
133978144 (slc6a11b)
Transporters [BR:
ssco02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
133978144 (slc6a11b)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
133978144
NCBI-ProteinID:
XP_062272488
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Position
3:complement(21613016..21638292)
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AA seq
611 aa
AA seq
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MTAEKSGPVINGKPEDGKDLEGSSSSLDNREYNERGHWNNKIEFVLSVAGEIIGLGNVWR
FPYLCYKNGGGAFFVPYVIFFVCCGIPVFFLETALGQFTSEGGITCWRKVCPLFEGIGYA
TQVIEAHLNVYYVVILSWAIFYLFNCFTTELPWAGCGHYWNTENCVDFYGENATNITNPN
ATSPVIEFWERRVLQISDGIEHMGGIRWELAMCLALAWFICYFCIWKGPKSTGKVVYVTA
TFPYAMLLVLLIRGVTLPGAWDGIKFYLYPDISRLSDPQVWVDAGTQIFFSYAICLGCLT
ALGSYNSYNNNCYRDCIMLCCLNSGTSFLAGFAIFSVLGFMAYEQNVPIEAVAESGPGLA
FIAYPKAVTMMPLSPLWACLFFMMLIFLGLDSQFVCVESLVTAVVDMYPETFRRGYRREL
LILGMSIVSFFIGLIMCTEGGMYVFQLFDSYAASGMCLLFVAIFESICIGWVYGSDRFYQ
NIEDMIGYKPVFFIKWCWMILTPGICAAIFLFFLIKYKPLKYNNVYTYPDWGYGIGWFMA
MSSMVCIPLGMIWMIWKTPGTFSERMKKLTTPSPDLKMRGKLAALSPYAANDAKLKADGK
ISTISEKETHF
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgagaagagcgggcccgttataaacggtaaaccagaggatggcaaggacctg
gaagggtccagctccagcctagacaacagggagtacaatgagagaggccactggaacaac
aagatcgagtttgtcctgtctgtggccggagagatcattgggctgggcaatgtctggagg
tttccttacctctgctacaagaatggaggaggtgcattcttcgttccgtatgtcatcttc
ttcgtgtgctgcggcatccccgtgtttttcctggagactgccctgggtcagttcaccagt
gagggaggcatcacctgctggaggaaagtctgcccactgttcgagggtattggctatgca
acccaggtgattgaagctcatctaaatgtgtactatgtagtgatcctatcctgggccatc
ttctacctctttaactgcttcaccactgagctgccgtgggctggctgcggccactactgg
aatacagagaactgtgttgatttctatggagagaatgccaccaacattacgaaccccaac
gcaacttctccagtcattgagttctgggaacgcagagtactgcagatatccgatggtatt
gagcacatggggggaatacgctgggagttggccatgtgtctggccctggcctggttcatc
tgctacttctgcatctggaagggacccaagtcaactggcaaggttgtgtatgtgacagct
acatttccttacgccatgttgttggttctgctgatcagaggagtaacactgcccggagca
tgggatggaatcaagttctacctctacccagacatttcacgtctctcggaccctcaggta
tgggtggacgctggaacccaaatctttttctcctatgctatctgcttgggctgtctcact
gctcttgggagttacaattcctacaacaataactgctacagggattgcatcatgctgtgt
tgtctgaacagcggcaccagctttctcgcaggtttcgccatcttctctgtgctgggcttc
atggcctacgaacagaacgttcccatcgaggctgttgcagaatctggtcctggtcttgca
ttcattgcataccccaaagctgttactatgatgcctctgtctccactttgggcctgtctt
ttcttcatgatgcttatctttctcggactggacagtcagtttgtgtgtgtggaaagctta
gtgacagctgtggtggacatgtacccagagaccttcagaagaggctaccgcagagagctg
ctgattcttggcatgtctatcgtctccttcttcataggactcatcatgtgtacagaggga
gggatgtacgtcttccaactgtttgattcatatgctgccagcgggatgtgcttgctgttt
gtggccatatttgagtccatatgtatcggctgggtgtacggtagtgacagattctaccaa
aatattgaggacatgattggctacaaacctgtcttcttcatcaaatggtgctggatgatc
ctgaccccgggcatctgtgctgcaattttcttgtttttcctgattaaatacaaacccctg
aagtacaacaacgtgtacacctaccctgactggggctatggtatcggctggttcatggcc
atgtcctcgatggtctgcattcctctggggatgatctggatgatctggaagactcccggc
accttctctgagagaatgaagaagctgacaactccaagcccagacctgaaaatgagaggg
aaactcgccgccctcagtccttatgccgccaacgatgcaaaacttaaggctgatgggaaa
atatccaccatctcagagaaggagacgcatttctaa
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