Scomber scombrus (Atlantic mackerel): 133980260
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Entry
133980260 CDS
T10651
Name
(RefSeq) uncharacterized protein LOC133980260
KO
K05413
CD86 antigen
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03267
Virion - Adenovirus
ssco04514
Cell adhesion molecule (CAM) interaction
ssco04517
IgSF CAM signaling
ssco04620
Toll-like receptor signaling pathway
ssco04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03267 Virion - Adenovirus
133980260
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
133980260
04517 IgSF CAM signaling
133980260
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
133980260
04672 Intestinal immune network for IgA production
133980260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
133980260
04090 CD molecules [BR:
ssco04090
]
133980260
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133980260
CD molecules [BR:
ssco04090
]
Proteins
133980260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
C2-set_3
ig
Ig_2
KIAA1549
ECSCR
Motif
Other DBs
NCBI-GeneID:
133980260
NCBI-ProteinID:
XP_062274909
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Position
5:complement(10237921..10248189)
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AA seq
284 aa
AA seq
DB search
MMASSQILQCFLNQLLLLRLTPIWAVIGLLFVTVWPTVAQLQLKGEVGQNVTFDCPRDKS
KEIKLFYLQKDTVYVNGYHVNKPLSESWENTERDDWTTVHMYRLNISHQGTYFCIIQYTD
NQLDDKQQIHLSVTANYSKPTVTVSCDKNHEYGGCLVRCASQGGYPRNKMMLNRPATWNT
SHQIWKVLNSSEHQDKDSMLFDSSSTACFNCSYGKQEMLSCSVGEVTSDMFSVCEPPPDT
GNHDVIVKAICAIVVFIIVVVLVLLCRCRKGRQAGDAAGSVRPE
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgatggcttcaagtcagatcctacagtgttttctaaaccagcttctcctgctgcgtctg
actccgatttgggcagtaataggtctcttgtttgtcacagtgtggccaactgttgctcag
cttcagctcaaaggggaggttggtcaaaacgtgacttttgactgccccagagacaaaagc
aaggaaattaaattattctaccttcagaaagacacggtatatgtgaatggctaccatgta
aataaacctctaagtgagtcatgggagaacaccgaacgggacgactggacaactgtgcat
atgtacagattaaatatctcacaccaaggaacctatttttgtattatccaatacactgac
aatcagcttgatgataaacaacaaatacacctcagtgtcacagccaactacagcaagcct
acagtcacagtgtcctgtgataaaaaccatgaatatggcggttgcctggtgagatgcgcc
tcacaaggtggatacccacgcaacaagatgatgttgaacagacccgcaacttggaatacc
agccaccagatatggaaagttttgaacagcagcgaacaccaagataaagactcaatgttg
ttcgacagttccagtactgcatgtttcaactgctcatacgggaagcaagagatgctcagc
tgctctgtgggcgaagtcacgtcagacatgttctcagtctgtgaaccccctcctgacact
ggcaaccatgatgtgattgtaaaagccatctgtgcaatagtggttttcattattgtggtg
gtattggtgctcctgtgtagatgcaggaaaggaagacaagcaggagatgcagcaggaagt
gtgaggcctgagtaa
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