Scomber scombrus (Atlantic mackerel): 133984574
Help
Entry
133984574 CDS
T10651
Name
(RefSeq) E-selectin-like isoform X1
KO
K06494
selectin, endothelial cell
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
133984574
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssco04515
]
133984574
04090 CD molecules [BR:
ssco04090
]
133984574
04091 Lectins [BR:
ssco04091
]
133984574
Cell adhesion molecules [BR:
ssco04515
]
Lectins
Selectins and C-type lectins
133984574
CD molecules [BR:
ssco04090
]
Proteins
133984574
Lectins [BR:
ssco04091
]
C-Type lectins
Selectins
133984574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sushi
Lectin_C
EGF
Motif
Other DBs
NCBI-GeneID:
133984574
NCBI-ProteinID:
XP_062279969
LinkDB
All DBs
Position
8:complement(13651352..13655225)
Genome browser
AA seq
642 aa
AA seq
DB search
MEFCFGLLQTSGSKRSASWISLTLLYSMLCMWTSVECWSYYYSNDTMNWSQARAWCREHY
TDMVAIQNQEEIGHLNTWLPRKSTYYWIGIRKINDVWTWVGTNKALTPEATNWAVGEPNN
GKKRKRGGLNEDCVEMYIKREQQPGKWNDERCEKTKTALCYTAACKNDSCIQGECVETIN
SHKCECFEGFYGERCEHVVKCDKNKVTVPNKGSVNCTHTNGNFSYDSKCSYSCEEGYQLS
MSRPLKCTASKTWSEQPPTCKLVQCPKLSDLESGSMNCSDPLGPLSYQSTCVFTCAEGYA
LVGSSSNTLQCETSGQWNDSLPLCVPVQCPALQDPENGHVSCSDNKDMRYTYGFTCSFSC
VPGYKLVGPSKVTCTSSAEWNEGMPRCEAITCQNPEGEAHLIPRCSHPELRPDSTCSFSC
EAGFELQGADSIKCSENGQWTKAIPTCKAMGCPAPEVQTRVGVSCTPSLSSPVSAGTPYP
LGIVCTFSCDEGNELQGALSMECVRSGQWTFTPPTCIAKRCPLLESPENGHVNCSNSEPV
YNSQCSFTCNQDFSLDGHDLLTCDRHGNWTGEIPNCQAPASQTPAIASGLAAGGGVLTLS
GLSAALWVLKRLRRKATKFELNSTSDIEDPPQVYKNSIDSLI
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggagttctgctttggattacttcagaccagtggatcgaagcgctctgcctcatggatc
agcttgacccttctttactcaatgctgtgcatgtggactagtgtagaatgctggtcctat
tactactctaacgacaccatgaattggtcacaagcaagagcctggtgcagggagcactac
acagacatggtggccatccagaaccaggaggagattgggcatctcaacacgtggctgccc
aggaaatccacatactactggattggaatccgcaaaatcaatgatgtctggacctgggta
ggcaccaacaaggctctgacaccagaagcaaccaactgggcagtgggagaaccaaacaac
ggcaaaaaaagaaagagagggggtttgaatgaggactgtgtggagatgtacattaaaaga
gaacagcagccgggcaaatggaatgatgagagatgtgagaagactaagaccgctctgtgc
tacacagctgcctgtaagaatgattcatgcatccaaggagagtgtgtagaaaccatcaac
agccacaagtgtgagtgctttgaaggattttacggagagaggtgcgagcatgttgttaag
tgtgacaaaaacaaggtgaccgtcccaaataaaggaagtgtgaattgcactcatacgaat
ggaaacttctcctatgactccaagtgcagctattcttgcgaggaaggataccagctgagt
atgtcgagacccctgaagtgcactgcctccaaaacctggtccgagcagcctcctacatgt
aaattggttcagtgtccaaagctgtccgatctagaaagtggatccatgaattgttccgat
cctctgggccctctcagctaccagtccacctgtgtgtttacctgtgctgaaggctatgct
cttgttggttcctcatctaacactctgcaatgtgaaacgtcagggcagtggaatgactcg
ctccccctttgtgttcctgtccagtgccctgctctccaggacccagagaatggccatgtc
agctgctcagacaacaaagatatgaggtacacctatgggttcacctgcagcttcagctgt
gtgcctggctataaactggttggaccgagcaaagtgacctgcacgtcatcagctgagtgg
aatgagggaatgcctcgctgtgaagcaattacttgtcaaaatccagagggagaagctcac
ctgataccccggtgtagccatcctgaactgcggccagactctacctgcagcttcagctgt
gaagcaggctttgaactgcaaggagcggactctattaaatgttctgagaatggacagtgg
accaaagccatacctacctgcaaagcaatgggatgtcctgctcctgaggttcaaacaaga
gtgggagtcagctgcaccccttctctttcttcccctgtttctgccgggaccccatatcca
cttggtatagtctgcacctttagctgtgatgaaggcaatgagctacaaggtgcactcagc
atggagtgtgttcgttcaggccagtggaccttcacaccaccaacctgcatagccaaaaga
tgccccctgcttgagtctcctgaaaacggtcatgtcaactgctcaaacagtgagccagta
tataactctcagtgctccttcacatgcaatcaagatttctcattggacggacatgatctg
ctgacatgtgatcgtcatggcaactggacaggagagataccgaactgccaagctcctgca
tctcagactcctgccattgcctctggtctggcagcagggggaggggttttgacattgtcc
ggtctgtctgcggctttgtgggtcctgaaacgactgagacggaaagcaaccaagtttgag
ttgaacagcacctccgacatagaggacccaccacaggtttacaaaaacagcattgacagt
ctcatatag
DBGET
integrated database retrieval system
