Scomber scombrus (Atlantic mackerel): 133987185
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Entry
133987185 CDS
T10651
Symbol
pym1
Name
(RefSeq) partner of Y14 and mago
KO
K14294
partner of Y14 and mago
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03013
Nucleocytoplasmic transport
ssco03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133987185 (pym1)
03015 mRNA surveillance pathway
133987185 (pym1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssco03019
]
133987185 (pym1)
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
133987185 (pym1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago-bind
DUF8073_N
Dynactin_p22
Motif
Other DBs
NCBI-GeneID:
133987185
NCBI-ProteinID:
XP_062282454
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Position
10:complement(25266291..25273539)
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AA seq
202 aa
AA seq
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MATPYVQDDSGKYIAATQRPDGTWRKPRRVKDGYTPQEEVPVYENKYVKFFKGKPDLPPG
LNQADAASPKQIPGCVDSETAGLSKAAKRNMKRKEKRKQQQPQGPDGDADVESVSEAVEN
VSISDGGESSDKAAAISVSSPDESPAEKAKKIKNLKKKLRQVEDLQQKMDSGEIKEPTKD
QLEKLGRAEALQAELQQLECDS
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccccctatgttcaagatgactctgggaaatatattgcagccactcagcgacct
gatggcacatggaggaagccgagacgggtgaaggatggttataccccccaggaagaagtc
cctgtctatgaaaacaagtatgtgaagtttttcaagggcaaaccagaccttccaccaggc
ctgaaccaagctgacgctgcttcgccaaagcagatccccggctgcgtggacagtgagaca
gccggtctctcaaaggctgccaagcgcaacatgaaacgtaaggagaaacgaaaacagcag
cagcctcagggcccggacggggacgctgatgtggaatcagtaagcgaagctgtcgagaac
gtgtccatttcagacggcggcgagtcttcagacaaggcggcggccatctctgtctcgtct
cctgatgaatccccagctgaaaaagccaagaagatcaaaaatctgaaaaagaagcttcga
caggttgaggacctgcagcagaaaatggactcgggggaaataaaagagccgacaaaagat
cagttggaaaagctcggtcgggcagaggccttacaagctgagttacagcagctggagtgt
gattcttga
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