Scomber scombrus (Atlantic mackerel): 133987222
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Entry
133987222 CDS
T10651
Name
(RefSeq) calcium-responsive transactivator-like
KO
K15623
protein SSXT
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133987222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssco03036
]
133987222
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133987222
GBAF(ncBAF) complex
133987222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
133987222
NCBI-ProteinID:
XP_062282502
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All DBs
Position
10:complement(21691735..21697938)
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AA seq
417 aa
AA seq
DB search
MSVAFSSARPRSKGEVTQQTIQKMLDENHHLIQCIMDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTPNMSIGPGGMGQGGGHAPSNLNDNMATGLPPTSMMQSQMS
NGPSHAPMQQQSGQVQSAIPSTSLSLPANSYGSSASASGYSHAAPSSQASMIQGPGPGYG
SSSSSSSTSSSSSSSSRSNLNMQSNQVSMMHQQSATPHYSSAQAGGQHYQGQQAMGMMGQ
GSQGNSMMSQRPMGSYRSSQQGSAQQYMGQDEFYGEQYGHTQSSSEPINQQYYPDGHGEY
SYQQSSYGEQGYERSFDESSQHYYEGGNPQYSQQQAQYQQGSGQQQSFSQQQYSSQQGYS
GQPQGYGPGQGGSSQYSQYQQGQSQQYGSYRSSQGGPGAQTQRPYTYEQGQYGNYQQ
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcattttcatcggcgcgtcccagaagtaaaggggaggtgacacagcaaacg
attcaaaagatgctggatgaaaatcatcatttaatacaatgtataatggattaccaaagc
aaagggaagacagctgaatgcacacagtatcagcagatcctgcacagaaatcttgtttac
ttagccacaatagcagattcgaatcagaacatgcagtcactactacctgcgcctcccact
ccaaacatgtctataggtcctggaggaatgggccagggtgggggacacgctccaagcaac
ctcaatgacaacatggcaacaggactgccaccgacatccatgatgcagagtcaaatgagc
aatggccccagccatgctcccatgcagcagcagtctggtcaggtgcagtcggctattccc
tccacatccctcagcctcccagccaacagctacggtagctcggcctcagcctccggctac
agccacgctgcaccctcctcccaggccagcatgatccaggggcctgggcctggctatggc
tcttcctcctcttcttcctccacatcctcatcctcctcttcctcctcccgcagcaacctc
aacatgcagtccaaccaagtctccatgatgcaccaacagtctgccactcctcactactcc
tcagcccaggctgggggccaacactatcagggacagcaggccatgggcatgatgggtcag
ggtagtcaaggaaacagtatgatgtctcagaggcccatgggatcctatcgctcttcacag
caaggatctgcacagcagtacatgggacaagacgagttctacggagagcagtatggacac
actcagagctccagcgagcccataaaccagcaatattaccctgatggtcatggagagtac
tcatatcaacaatcttcatatggtgagcaaggctatgagaggtcctttgatgaatcctca
caacattactatgaaggaggtaaccctcagtacagtcaacaacaggcccaatatcagcag
gggtctggtcagcagcagtccttcagccagcagcagtactcctctcaacaaggctacagt
ggacagccacaaggatacggacctggccagggtggatcttctcagtattctcagtatcaa
cagggtcaaagccaacagtatggttcttaccgctcctcccagggaggccctggagcacag
acacagaggccctacacctatgaacagggtcagtatggaaattatcagcaataa
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