KEGG   Scomber scombrus (Atlantic mackerel): 133987279
Entry
133987279         CDS       T10651                                 
Name
(RefSeq) troponin C, skeletal muscle-like
  KO
K12042  troponin C, skeletal muscle
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco04020  Calcium signaling pathway
ssco04814  Motor proteins
ssco04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    133987279
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    133987279
   04820 Cytoskeleton in muscle cells
    133987279
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ssco04812]
    133987279
Cytoskeleton proteins [BR:ssco04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Troponins
     133987279
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_6 EF-hand_5 EF-hand_8 EF-hand_FSTL1 EF-hand_9 AIF-1 EH SPARC_Ca_bdg EF-hand_11 EF_EFCAB10_C SPEF2_C
Other DBs
NCBI-GeneID: 133987279
NCBI-ProteinID: XP_062282572
LinkDB
Position
10:complement(4812672..4824739)
AA seq 217 aa
MDRLLAFSSDEERDEEVCISWCCQSGSEHALVECGDIIGKLNSRPGPRGRQRGWLRGPTD
AQSDARSFLTEEMIAEFKAAFDMFDTDGGGDISTKELGQVMRMLGQNPSREELDAIIEEV
DEDGSGTIDFEEFLVMMVQQLKEDQAGKSEEELSECFRIFDKNGDGFIDREEFGDILHLT
GEPVVEEDIDELFGESDNNKDGKIDFDEFLKMMENVQ
NT seq 654 nt   +upstreamnt  +downstreamnt
atggacaggctgttagccttcagcagtgatgaggagagggatgaagaggtctgcatcagc
tggtgctgtcagtcaggcagcgagcatgcactcgtcgaatgcggtgacatcattgggaag
ctgaactcgcgcccaggcccccggggaaggcagaggggatggctgagagggcccactgac
gcccaaagcgatgcccgctccttcctgactgaggagatgattgcagaattcaaggctgct
ttcgacatgttcgacaccgatggtggcggtgacatcagcaccaaggagttgggccaggtg
atgagaatgctgggccaaaacccgtcaagggaggagttggatgccatcattgaggaggtg
gatgaggacggcagcggtaccattgacttcgaggagttcttggtcatgatggtgcaacag
ttaaaggaggaccaggccggaaagagtgaagaagaactttcggaatgcttccgtattttt
gacaaaaacggagacggtttcatcgaccgggaggagtttggagacattctccatctcacg
ggagaaccagtcgtagaagaagatattgatgagctgtttggggaatctgacaataacaag
gacggaaaaattgattttgatgaatttctgaagatgatggagaacgtccagtaa

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