Scomber scombrus (Atlantic mackerel): 133987475
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Entry
133987475 CDS
T10651
Symbol
spo11
Name
(RefSeq) meiotic recombination protein SPO11
KO
K10878
meiotic recombination protein SPO11
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssco03036
]
133987475 (spo11)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
133987475 (spo11)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
Motif
Other DBs
NCBI-GeneID:
133987475
NCBI-ProteinID:
XP_062282844
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Position
10:complement(21545159..21552490)
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AA seq
390 aa
AA seq
DB search
MGSHVAGLFTEIDKLRVQLLINAEVMADCQCVQEEINNNVIFTRIENIILGIVTSLSKDE
APVLALPNRSSWANISFDSAVGLRMSSESSVTTIRSDCPMSVTKFAQILKILSVIYRLVQ
SNSYATKRDIYYNNTQLFGSQKTVDNIVDDICCMLKVPRRSLHVLATSKGLISGDLCYIE
EDGTRIDCHSSSAAVAVSSNIGGIRDIVSSAKFVMIVEKDATFQRLLDDDFCTKHSPCII
ITGKGVPDVNSRLMVRKLWDTLHIPIFALVDADPHGIEIMCIYKYGSVAMSFEAHSLTVP
SVMWLGLLPSDLQRLRVPEVALIPLTKRDESKLNSLLERPYLTSQPAWQKEMELMKQSKV
KAEIQSLAAIAPDFLTSIYLPNKLRFGGWV
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgggatcccatgtagcagggctgtttacagaaattgacaagctccgtgttcaactactg
atcaatgctgaggtaatggcggactgccagtgtgtccaggaagaaataaacaacaatgtc
attttcacccgcattgaaaacataattctgggaatagtgaccagtctgtctaaagatgag
gcccctgtcctggcactgcccaacagatccagctgggctaacatcagttttgacagtgcc
gtcgggcttcgaatgagttcagaaagctctgtcaccaccattaggagcgactgtcctatg
tctgtcactaaatttgcacaaattctcaagattctctcagtcatctacagacttgtgcag
agtaactcatatgctacaaaaagagacatctactacaacaatacacagctgtttggttca
cagaaaactgtggataatattgtggatgatatctgctgcatgctaaaggttcctcgcaga
tcactgcatgtgttggccacgtccaagggattaatatcaggtgatctgtgttacatagag
gaggatggcacaaggattgactgccactccagctctgctgctgttgcagtttcctcaaac
attggtgggattagagatattgtatcatctgcaaaatttgtcatgatagttgagaaggat
gcaacatttcagagactgctggatgacgacttctgcacaaagcattctccttgcatcata
atcacaggcaaaggcgtgccagatgtgaacagcaggttgatggtgagaaaactctgggac
acgctgcacatccccatcttcgccctggtggatgctgaccctcatggcattgagatcatg
tgtatctacaagtacggatcagtggccatgtcgtttgaggcccacagtctgaccgtcccc
agcgttatgtggctaggcctcctcccctctgacctccagagattgcgggttccagaggtc
gccctgatccccctcaccaagagagatgaaagcaaactcaacagcctccttgaaagaccg
tacttaactagccaaccggcgtggcagaaagagatggagctcatgaagcagagtaaggtc
aaggctgaaatacagtccctggcagccatagctcctgatttcctcaccagcatctacctg
cccaataagctgcgttttggaggctgggtatga
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