KEGG   Scomber scombrus (Atlantic mackerel): 133987484
Entry
133987484         CDS       T10651                                 
Name
(RefSeq) tubulin alpha chain-like
  KO
K07374  tubulin alpha
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco04145  Phagosome
ssco04210  Apoptosis
ssco04517  IgSF CAM signaling
ssco04530  Tight junction
ssco04540  Gap junction
ssco04814  Motor proteins
ssco05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    133987484
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    133987484
  09143 Cell growth and death
   04210 Apoptosis
    133987484
  09144 Cellular community - eukaryotes
   04530 Tight junction
    133987484
   04540 Gap junction
    133987484
  09142 Cell motility
   04814 Motor proteins
    133987484
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    133987484
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssco03019]
    133987484
   03036 Chromosome and associated proteins [BR:ssco03036]
    133987484
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ssco04812]
    133987484
   04147 Exosome [BR:ssco04147]
    133987484
Messenger RNA biogenesis [BR:ssco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     133987484
Chromosome and associated proteins [BR:ssco03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     133987484
Cytoskeleton proteins [BR:ssco04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    133987484
Exosome [BR:ssco04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   133987484
  Exosomal proteins of other body fluids (saliva and urine)
   133987484
  Exosomal proteins of colorectal cancer cells
   133987484
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 133987484
NCBI-ProteinID: XP_062282852
LinkDB
Position
10:27378780..27381656
AA seq 451 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKAIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRSGSYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSVDGEGEEEGEEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatctctatccacgttggtcaggctggagtccagattggcaatgcctgc
tgggagctttactgcctggagcatgggatccagccggacggacagatgcccagtgacaaa
gccatcggaggaggagacgattccttcaacaccttcttcagtgagactggagcgggaaaa
cacgtccccagggctgtttttgtcgatctggagcccacagtcatcgatgaggtacgtagt
gggtcctaccgccagctcttccaccctgagcagctgatcactggcaaggaggatgctgcc
aacaactacgcccgaggacactacaccatcggcaaagagatcattgacctggtgctggac
aggatccgcaaactgtctgaccagtgcacaggccttcagggtttcctggtattccacagc
ttcggaggtggcaccggctctggtttcacctccctcctgatggagcgtctgtctgtcgac
tacggcaagaagtccaaactggagttctccatctacccagctccccaggtgtccaccgct
gtggtggagccctacaactccatcctgaccacccacaccaccctggagcactctgactgt
gccttcatggtagataacgaggccatctacgatatctgccgtaggaacctcgatatcgag
cgtccttcctacaccaatctgaacaggcttattggtcagattgtgtcctccatcactgct
tcccttcgtttcgatggtgccctcaatgttgatctgactgagttccagaccaacttggtg
ccatatccccgtatccacttccctctggccacctacgcccccgtcatctcagctgagaag
gcttaccatgagcagctctcagtctccgagatcacaaacgcctgtttcgagccagccaat
cagatggtgaaatgtgaccctcgccacggcaagtacatggcttgctgccttctgtaccgt
ggtgatgtggttcccaaagatgtgaatgctgccattgccaccattaaaaccaagcgctcc
atccagtttgtggactggtgtcccactggtttcaaggttggcatcaactaccagcctccc
accgtggttcccggtggagatctggccaaggtccagagggctgtgtgcatgctgagcaac
accactgctattgcagaggcctgggctcggcttgaccacaagtttgacctgatgtacgct
aagcgtgcctttgttcactggtatgtgggtgagggtatggaggagggagagttctctgag
gccagagaggacatggcagctctggagaaggattacgaggaggttggagtcgactctgtt
gacggtgagggagaggaggaaggagaggaatattaa

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