Scomber scombrus (Atlantic mackerel): 133987868
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Entry
133987868 CDS
T10651
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03030
DNA replication
ssco03410
Base excision repair
ssco03420
Nucleotide excision repair
ssco03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
133987868 (rfc2)
03410 Base excision repair
133987868 (rfc2)
03420 Nucleotide excision repair
133987868 (rfc2)
03430 Mismatch repair
133987868 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssco03032
]
133987868 (rfc2)
03036 Chromosome and associated proteins [BR:
ssco03036
]
133987868 (rfc2)
03400 DNA repair and recombination proteins [BR:
ssco03400
]
133987868 (rfc2)
DNA replication proteins [BR:
ssco03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
133987868 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
133987868 (rfc2)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
133987868 (rfc2)
DNA repair and recombination proteins [BR:
ssco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
133987868 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
133987868 (rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
nSTAND_NTPase5
AAA_lid_RFC1
AAA_14
RCF1-5-like_lid
AAA_16
Viral_helicase1
Rad17
AAA_11
nSTAND3
Mg_chelatase
DEAD
DNAX_ATPase_lid
AAA_19
MipZ
RuvB_N
AAA_5
AAA_18
AAA_28
AAA_30
AAA_assoc_2
NTPase_1
AAA_25
MeaB
SLFN-g3_helicase
AAA_23
RNA_helicase
AAA_24
ABC_tran
AMP-binding_C_3
T2SSE
AAA_2
Motif
Other DBs
NCBI-GeneID:
133987868
NCBI-ProteinID:
XP_062283325
LinkDB
All DBs
Position
10:32756795..32762915
Genome browser
AA seq
351 aa
AA seq
DB search
MAQQKEQKEEMEVMEQKDVMEAEQKQTAGSYQLPWVEKYRPVQLQHVVGNHETVSRLQVF
AREGNVPNIIISGPPGTGKTTSILCLARALLGGSMKDAVLELNASNERGIDVVRNKIKMF
AQQKVTLPKGRHKIIILDEADSMTDGAQQALRRIMEIYSKTTRFALACNASDKIIEPIQS
RCAVLRYSKLTDGQILSRLQEVVEQERLSVSDDGLEAVIFTAQGDMRQALNNLQSTHSGF
GFINSENVFKVCDEPHPLLVKGMLGHCVDGNITEAYRVVEQLWALGYSPEDIIGNIFRVC
KTFQMAEYLKLEFIKEIGYTHMRVTEGVNSLLQMAGLLGRLCSKTAPPAAC
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagaaagagcagaaggaggagatggaggtgatggagcagaaggacgtgatg
gaggctgaacagaagcagacagcaggaagctaccagctgccttgggtggagaagtaccgg
ccggtgcagctgcagcacgtggtgggaaaccacgagactgtgagcagactgcaggtgttc
gcgagggaggggaacgtgcccaacatcatcatatccggcccccccggcacagggaagacc
accagcatcttgtgtctggctcgagctctgctgggaggatccatgaaggacgcagtgctg
gagctcaacgcctccaacgagcgaggcatcgatgtggtgaggaacaagatcaagatgttt
gctcagcagaaggtgacgcttcctaaaggacgacacaagatcatcatccttgacgaagcc
gacagtatgacagacggggctcagcaggctctgaggaggatcatggagatctactctaag
acgactcgcttcgctctcgcctgcaacgcgtctgataaaatcatcgagccgatccagtcc
cgctgcgctgtgctgcgttactccaagctgacggacggtcagatcctgtcccggctgcag
gaggtggtggagcaggagcgtctgtccgtgtccgacgacgggctggaagccgtcatcttc
accgctcagggagacatgagacaggcgctgaacaacctgcagtctacacactccggcttc
ggtttcatcaacagcgagaacgtgttcaaagtgtgcgacgagccccaccccctgctggtg
aaaggcatgctgggacactgcgtggacgggaacatcacggaggcgtaccgcgtggtggag
cagctgtgggcgctgggttactcccccgaggacatcatcgggaacatcttcagggtctgc
aagaccttccagatggccgagtacctgaagctggagttcattaaggagatcggttacaca
cacatgcgagtgactgaaggtgtgaactcactgctgcagatggccgggctgctgggtcga
ctctgcagtaagacggcgccacctgctgcctgctga
DBGET
integrated database retrieval system
