Scomber scombrus (Atlantic mackerel): 133991951
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Entry
133991951 CDS
T10651
Symbol
otx1
Name
(RefSeq) homeobox protein OTX1 B isoform X1
KO
K09326
homeobox protein OTX1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133991951 (otx1)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
133991951 (otx1)
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Gene cluster
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
CPSF73-100_C
Homeobox_KN
SatD
Motif
Other DBs
NCBI-GeneID:
133991951
NCBI-ProteinID:
XP_062286551
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Position
12:complement(23735379..23739841)
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AA seq
340 aa
AA seq
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MMSYLKQPPYGVNGLGLSGAAMDLLHPSVGYPGTHTHCSAATPRKQRRERTTFTRSQLDV
LESLFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSGSSAKARPPKKKS
SPARESTGSESSGQFTPPAVSSTGSSSSSSSSTNHTGPAALSSTSTSISTVSSIWSPAIS
PGNAPAPAVAPLPEPGPPSNASCMQRSMSGSAAAATSYPMSYNQTPGYGQGYPTPSSSYF
SGVDCGSYLAPMHSHHHPHQLSPMTASSMSGHPHHHISQSSGHHHHHHHHQAYGGSGLAF
NSSDCLDYKEQTAASSWKLNFNTTDCLDYKDQASWRFQVL
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctacctcaaacagcccccctacggcgtcaatggcctggggctgagcggcgct
gccatggacctgctgcacccctcagtgggctacccaggtacacacacacattgctccgca
gcgactcccaggaagcagcgcagggagcggaccaccttcacccgctctcagctcgacgtg
ctggagtctctgttcggtaaaacccgctacccggacatcttcatgcgggaggaggtggcg
ctgaaaatcaacctgcccgagtccagagttcaggtgtggttcaagaaccggagggccaag
tgtcgccagcagcagcagagcggcagcagcgccaaagccaggccgcctaagaagaagtct
tctccagcccgcgagagcaccggatcggagagcagcggccagttcacgcctcccgccgtc
tccagcacgggttcgtcctcgtcctcgtcctcctccaccaaccacacaggcccggcggca
ctcagcagcacctctacctccatcagcacagtctcctccatctggagccccgccatctcc
cccggaaacgctcccgctccagccgtggcccctctcccagagcccggacccccttctaac
gcctcctgtatgcagcgctcaatgtcaggctctgccgccgctgccacctcctaccccatg
tcctacaaccagacgccgggctacggccagggctacccgaccccctccagctcctacttc
agcggcgtggactgtggctcctacctggctcccatgcactcccaccaccacccccaccag
ctcagccccatgacggcctcctccatgtcaggccacccgcaccaccacatcagccagtcg
tcgggccaccaccaccatcaccaccaccaccaggcctacggcggctccggcctggccttc
aactcctccgactgcctggattacaaagagcagactgcggcctcctcgtggaagctcaac
tttaacaccacagactgcttggactacaaagaccaggcctcctggaggttccaagtcttg
tga
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