Scomber scombrus (Atlantic mackerel): 133992118
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Entry
133992118 CDS
T10651
Name
(RefSeq) polycomb group RING finger protein 5-B-like
KO
K11489
polycomb group RING finger protein 5
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133992118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssco03036
]
133992118
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
133992118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_4
zf-RING_UBOX
zf-RING_5
zf-Nse
zf-RING_10
zf-rbx1
zf-RING_6
Actin_micro
TRAF3_RING
zf-C3HC4_3
zf-C3HC4_5
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
133992118
NCBI-ProteinID:
XP_062286791
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All DBs
Position
12:28215643..28235905
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AA seq
248 aa
AA seq
DB search
MAATGRRHMVKDFNHFITCYLCRGYLIKPTTVTECLHTFCKSCIVQHFEESNDCPKCGIQ
VHETNPLEMLRLDNTLEEIIFKLVPGLREKEEKQELEFWKKNQPKENGQAETLRCQRVGL
PDVGGDGGDGDGGDDGDGEGDDDYHRSDPQIAICLDCLRNTGQSGESTVTDLMKRFIRCS
SRVTVGTIKKFLSLKLKLPSSYELDVLCNGEIMGRDHTMEFIYMTRWRLHGENTYPMVLE
YRPRIDFG
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggccgccacaggaaggaggcacatggtgaaggattttaaccatttcatcacctgttac
ctgtgtcgaggttacctgattaaaccgaccacggtcaccgagtgcctgcacaccttctgt
aagagctgcatcgtgcagcactttgaggagagtaacgactgtcctaagtgtggcatccag
gtccacgagacaaacccgctggagatgctcaggttggacaacaccctggaggagatcatt
ttcaagctggttcccggactcagagaaaaagaggaaaagcaggagctcgaattctggaag
aagaaccagcccaaagaaaacggccaagcagaaaccctgaggtgtcagagagtcgggctt
cctgatgtcggaggcgatggcggcgacggggacggtggtgacgacggcgacggtgaagga
gacgacgactaccacagaagcgaccctcagatagctatttgtctggactgcttacgcaac
acgggacagtcgggggagagcactgtcacggatttgatgaagaggttcatccgctgctcc
agtcgagttaccgtgggaacgattaagaagtttctcagtcttaaactcaaactacccagc
tcgtatgagctggatgttctgtgtaacggagagataatgggcagagatcacactatggag
tttatctacatgactcgatggaggctacatggagagaatacgtatcccatggttctcgag
taccggccacgcatcgacttcggctga
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integrated database retrieval system
