Scomber scombrus (Atlantic mackerel): 133992200
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Entry
133992200 CDS
T10651
Symbol
lrpprc
Name
(RefSeq) leucine-rich PPR motif-containing protein, mitochondrial
KO
K17964
leucine-rich PPR motif-containing protein, mitochondrial
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ssco03029
]
133992200 (lrpprc)
Mitochondrial biogenesis [BR:
ssco03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
133992200 (lrpprc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_24
PPR_2
PPR
PPR_3
PPR_long
PPR_1
TPR_19
ELYS
TPR_MalT
SPO22
ARM_TT21
Motif
Other DBs
NCBI-GeneID:
133992200
NCBI-ProteinID:
XP_062286894
LinkDB
All DBs
Position
12:complement(20826841..20888155)
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AA seq
1420 aa
AA seq
DB search
MSALLRSARLLRFSPSGLLQLTATKRTGPPLGRLYSGALTGTRTGACSRLASGNVCSRVW
PNAAGCVRTYAIATEQKDEASVAVRSKQAQQFDWALTKLDSSVRRTGRITKTLLLRVFHD
ICRTGYPSGNQALLLLRSCGSLLPEVPLEERTELAHRVWEKLQDLGAQYDVSHYNAMLKV
YLQNDFKFSPTDFLAKMEAANVQPNRVTYQRLIAAYCQNGDIEGASTILGFMKSRDLPIT
EAVFNSLLTGHARAGDITSSQNILTVMRGAGIEPGPDTYVSLLNVYAEKGDMDSLKKTLE
AAESADCSLMDKDIMQVIFTLAKAGHQQQVPEIVERLRHERGYIPDAMNLCLSLITQGLE
DTAFHILKTFPVQNDGNSDSPDLGSFFLRHCVNMGTSLEKISGYCKELQEANLHSAPLKF
TLCCALEAKKTGLSLELMKMLKEQDLPIRPHYFWPLLTQHVKDNNTADVVDVVKGMQELG
VIPDVETLTNYILPVFPSMEAARKALQDAGVSLESEGFLSSEIRSVAATNLAELYTRLSD
SSFPPLDLIVFRGSLILGFRRSTDVESMAKITELLYKDERFSRENSKPVDTASFFMYNLI
DSMSEGEVQAQEDKLRKYFNQLQAQNIIISGNIYRGVRNLLDSYHVPELIKDVLALVDPK
DPLLSNGSAAAVPRATGTSNTAEELQKRLAKLKAENKPFDIILKQTINAFCAEENLQSAL
ELKQQHEDEMTAGGYAALINLCCRHDNVEEALSLKREMSRKDSSVALDAPKYLALVKTLS
KNGRVEEALDILKEMKEKDVVMSDTNITMLFHTLNSIVAKGGAPAIKRLQDTIFTLGLAK
PTANLCSPLITAYLESKDLAGALDAALECQKLYNQLPRIHDIIVGLVEKGDTELLQKAMD
VVSQERGEMTMLYDLFFAFLQTGRFREARKIIETPGLRARPGRLQWYAEKCIASSQMEAL
EQMVDMTAKLFECDRDEMYSYVLRFCKATNNWQKAEATWTKMQEENVIPRERTLRLLADI
LKKNGQEVPFEVPETWYEQAATTKEVKPAATPPKVESGNDYQAQLLALCKKGKAKEAYGM
LKEADKKGVVLGPAPYDHLVRALLAEGSIDDAMAVKEIAASHVPGFVLSDIASSLLIISY
SKKGQAKEALETLKSTLKADHVPSHLAVTRLVQGLGSCGDVAGIQEVEALMKSLGTTLNL
SSMLFINNTAMAHIKTGDLETAVEQLESVYTSPDSTNPSMSFVFRKVLEDDNDKALDKLS
AMAERLANHFACYRPASDLFLQLLDMDKVEDAKFMLARCNALAEQKVILMSYVAQKAQTP
GQVGKIKALLSLIPDFTEKELLYPYLMKCHSLDKDLPSAKALYEQMQKHGSVDELSLKRL
AVLYRNAGETLPFTEPPESFKFYAEKLKEKAAKTKTTAEE
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgctcttgagatcagcccggttactcaggttctcgccttcgggcttgcttcag
ctcacagcaaccaaaagaaccggaccgcctctgggtcggctgtacagcggggctctcacc
ggcaccaggaccggagcttgttcccgtctcgcctctggaaatgtgtgcagtcgtgtgtgg
ccgaacgccgcgggatgtgtgcgaacctacgccatcgccacagagcagaaggatgaggcc
agtgttgcggtgcggtccaagcaggcacagcagtttgattgggccctgacaaagctggac
agctctgtgaggaggacaggtcgcatcaccaagacactgctgctccgcgtcttccatgat
atctgcaggacaggttatcccagtggtaaccaggccttgctgctgctgcgtagctgcggg
tccctgctgcctgaggtgcctctggaggagcgcactgagctggctcaccgtgtctgggag
aagctgcaggatctgggtgcacagtacgatgtcagtcactacaatgccatgctgaaggtt
tacctgcagaacgatttcaagttctcacccactgacttcctggccaagatggaagcagct
aatgttcagcccaacagagttacctaccagagactcatcgcagcctattgccaaaatgga
gatatcgagggagccagcaccatcttgggtttcatgaagagcagagatctacccatcact
gaagctgttttcaactccctgttaacaggccatgctcgtgcaggcgacatcaccagttct
cagaacatcctgactgtgatgcgaggagcgggaattgaaccgggtcctgacacttacgta
tcactgcttaacgtctacgctgagaagggagacatggatagtctgaaaaagactctggag
gcagcagagagtgcagactgcagtctgatggacaaggacatcatgcaggttatcttcact
ctggctaaggccggacaccagcagcaagtcccagagatagtggagcgcttgaggcatgag
aggggttatattccagatgccatgaacctgtgtctgagcctcatcacccagggcctggag
gatacagctttccacattctgaagacttttccagtgcagaatgacggcaactctgactcc
cccgacctgggcagtttcttcctcagacactgtgtcaacatgggcacgtcactggagaag
atcagcggctactgcaaagagctccaggaggcaaatctgcacagtgcgccactcaagttc
accctgtgctgtgctctggaggccaagaagaccggattgtctttagagctgatgaagatg
ttgaaggagcaggacttacccataaggcctcactacttctggcccctcctcactcagcat
gtgaaggataacaacacagctgatgtggtggatgttgtgaagggcatgcaggagctcggg
gtgatccctgatgtcgagaccttaaccaactatatcctccccgtcttccccagcatggag
gcggctcggaaggccctccaggatgcaggtgtctctctggagtcggagggcttcttgtct
tcagagattcgctcggtggctgctaccaacttggcagaactctacacccgactgtctgat
tcatccttccccccgctggacctcattgttttccgtggcagcctcatcctgggcttcaga
aggtctactgatgtggagagcatggctaagattactgagctcttgtacaaagatgagcgc
ttctccagagaaaactccaagcctgttgacacagcatcattcttcatgtacaatctgatc
gatagtatgtcggaaggagaggttcaggctcaggaagacaaactgcggaaatacttcaat
caactacaggctcagaacataattatttcaggaaacatctacagaggcgtcaggaacctg
ctggactcctaccacgtcccagagctcatcaaggatgtgcttgccttggtggacccgaaa
gacccattgttgtccaatggttctgcagcagctgttcctcgtgccactggaactagcaat
acggcggaagagcttcagaagagactggccaaactgaaagctgaaaacaaaccatttgac
attatactcaaacaaactatcaatgctttctgtgctgaggagaacctgcagagcgccctt
gagctgaagcagcagcacgaggatgagatgacagccggcggctacgctgccctcatcaac
ctgtgctgtcgccacgacaatgtggaggaggcgctcagcctgaagagggaaatgagtcgt
aaggactcatctgtggcgctggatgcccctaaatacctcgcactggtcaagaccctctca
aagaatggcagagtggaggaagcgttggacatcctgaaggagatgaaggagaaggacgtg
gtgatgagtgacaccaacatcaccatgctcttccacacgctcaactccatagtggccaag
ggcggagcccctgcaatcaaacgcctgcaggacaccatcttcaccctcggacttgccaaa
cccaccgccaatctgtgctcacccctgattactgcatacctggagagtaaggacctggcc
ggagctctagatgcagcgctggagtgtcagaagctctacaaccaactgcctcgcatccac
gacatcatcgttggcctggtggagaaaggagacactgaactgctgcagaaagccatggac
gttgtgagtcaggagcgaggagagatgaccatgctgtatgatctgttcttcgccttcttg
cagacgggccgcttccgtgaggctcgtaagatcattgagacccctgggctgagggcaagg
cctggacgcctgcagtggtacgcagagaaatgcatcgccagcagccagatggaggccttg
gagcagatggtggacatgaccgccaaactgtttgagtgtgacagagatgagatgtacagt
tacgtcctccgtttctgcaaggcgacaaacaattggcagaaggccgaggcaacgtggaca
aagatgcaggaggaaaacgttattcccagggagaggaccctgcgcttgctggcagacatc
ctgaagaaaaatggccaggaggtgccctttgaggtgcctgagacctggtatgaacaagct
gccaccacaaaggaggtcaaaccagcagccaccccccccaaagtagaaagtggcaatgac
taccaggcccaactactggccctctgtaagaaagggaaagctaaagaagcctatggcatg
ctgaaggaagctgataaaaagggtgtggtactaggccccgccccttacgaccacctggtc
cgtgccctgttggccgagggctccattgatgatgcgatggcagtcaaggaaattgctgca
tcccatgtcccgggtttcgtactgagtgatatcgcttctagtttgctcatcatctcatac
agcaagaaaggccaggcaaaagaggctcttgagacactgaagtctacgctgaaggcggac
catgtgccctcgcaccttgcggtcaccagactggttcagggcctgggtagctgtggtgat
gttgcaggcattcaggaagtggaagcactgatgaaaagtcttggcacgaccctaaacctg
tccagcatgttgtttatcaacaacacggccatggcacacatcaagactggtgacttggaa
acagcagtagaacagttggagtcagtatataccagtccagacagcacaaatcccagtatg
tcctttgtcttcagaaaggttttggaagatgacaacgacaaagctttggacaagttgagt
gccatggcagagcggctggccaaccactttgcctgctacagaccagcttcagaccttttc
ctccagctgctggatatggacaaagtcgaagatgccaagttcatgctggctcgctgtaac
gccttggccgaacagaaggtgattctcatgtcctacgtggctcaaaaggctcagactcct
ggacaggtggggaaaattaaggccctgctgagcctgattccagacttcactgagaaggag
ctcctgtacccatatctgatgaaatgtcactctctggataaggacttgccatcagccaag
gctctgtatgagcagatgcagaagcatgggtcagtagacgagctgtcactcaaacggctg
gctgtgctgtaccgcaatgcaggagagacgttgcccttcactgagccccctgagtcattc
aagttttatgcagaaaagctgaaagagaaagctgccaaaaccaaaacaacagcagaagaa
taa
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