Scomber scombrus (Atlantic mackerel): 133993634
Help
Entry
133993634 CDS
T10651
Symbol
znf827
Name
(RefSeq) zinc finger protein 827 isoform X1
KO
K27104
zinc finger protein 827
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssco03036
]
133993634 (znf827)
Chromosome and associated proteins [BR:
ssco03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
133993634 (znf827)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_16
zf-C2H2_4
zf-H2C2_5
zf-H2C2_2
zf-C2H2_6
zf-C2H2_5
Motif
Other DBs
NCBI-GeneID:
133993634
NCBI-ProteinID:
XP_062288607
LinkDB
All DBs
Position
2:complement(23988539..24055120)
Genome browser
AA seq
1203 aa
AA seq
DB search
MPRRKQEQPKRLPSHLDSNEEGGPDGGPVEEEGWFGNASDTRSESSSYGDTQDELLLPRG
SSPDERPGVSTGSGDQDTCGGESSLGCPTPVRRASLELLGLDGGAFSAQDTLSSVVSSLY
GEAASRALGKPLSSNLRRLLEAGSLKLDTGELLGRSSRGGAGGESPPIGLAPPLTLSPSS
HHAQQLSALARKLANNNNNSGSASPASLAPSVTNIKQEPLDPFNSVTPSNGSGFVWAGVA
DKWPPASCSTPCGSSLSPDSAIQKLKAAANAVLQDKNAVASSSTTSSSSSNSASSAVPTL
GGGGRGDDVVRFDAFNSPFSPQSASSTLAALSKKVSERSQASSTASAATDHQASASSFLS
LVSMTSSAALLKEVAARAAGNMLAEKKEGSPLVNAGVLQEDVKPLLDKNQKAPTPSTPTQ
SLELLLPSTPKSRGKPNSQAGSPEDGGKPFQCPVCGLVIKRKSYWKRHMVIHTGLKSHQC
PLCPFRCARKDNLKSHMKVHQHQDRGETFQCELCPFTSSRHFSLKLHMRCHQHFPRTDVK
VKEELTTDTEGEGSVMGDSGSADMRGTEVSPLHSDNQQQTSPPVEASSNHVHIKEEPHER
ELSVLSPFSICRERPSSSANSLDLPGVGVGVGVRSSPSGPTTASLFSPDITTKTATDLLM
KLSAANQRETLKSPFHLKEEPKVEEALSPRPASRSQSQVQPSYPVTFCQDGPTGAAAAAE
RPGPLKPREGSPPAKNSLLSQDINIKVASELLMKLSESNKDAQYQKVKVKVEPMEVDPPP
AELTPPASHLLAFSTLRASEKSEPMTNLPETLSRPQKDLFSQDISVKMASELLFKLSEKV
SKANNHKDSNMVGINSPFLDECFRQSPFNSRSKSCSPAEASSSTRAAFHDSEKDDAELGN
GIAQWRLSEQLFPCPVCGKVFGRQQTLSRHLSLHTGSELQLGSGEEERKYKCHLCPYAAK
CRANLNQHLTIHSVKLVNTDADQIVSAVTADSAERKTCPYYYSCHVCGFQTELNAQFVGH
MSLHVDKEQWMFSLCCNVCDYVCMEENDMKNHISTGHAGLNSRSPLSETKSTSSSLSALS
DSLNSSEGGDLTHGNEELKSLLALPSSAGSQSSSGSHSGSGTEDKSDKGFECVFCNFVCK
TRSMYERHLQIHLITRMFECDVCHKFLKTPEQLLEHKKCHTVPSGGLKVCEALWGPEQMK
GAI
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggaggaagcaggagcaacccaagcgcctgccttcacatttggacagcaacgag
gaaggagggcctgacggcggtcctgtggaggaggaaggttggtttgggaatgcttctgac
acacgctcagagtcgtcatcctatggagacacccaggatgagctcctcctgccaaggggc
tcctctcctgatgaacggcctggcgtcagcactgggtctggggatcaagatacctgtgga
ggtgagagctcactgggttgccccacacccgtccgtcgtgcctctttggaacttcttgga
ctggatggaggtgcattctcggcccaggacacactctcctctgtggtatcatcgctgtac
ggcgaggcagcatctcgtgcccttggaaaacccctcagcagcaacctacggcgcctccta
gaggctgggtcgctgaaacttgacacaggggagctcctgggtcggtcatccaggggaggt
gcagggggggagtcccctccaataggtctagccccacctttgaccctctccccgtcttcc
caccatgcccagcagttaagtgctcttgcccgtaaactggccaataacaacaacaacagc
ggctcagcctcaccagcctccttggccccctcagtcactaacattaagcaagagcccctt
gacccttttaactctgtcaccccaagcaatggaagtggctttgtatgggcaggtgttgca
gataagtggccgccggccagctgctccacaccctgcggctctagcctgtccccggattct
gcaatccagaagttaaaagcagcagcgaatgctgtccttcaagacaagaatgctgtggcc
tcctcctcaacaacttcttcctcctcctccaactctgcctcatctgcagtgcccaccctc
ggagggggtggtcgaggagatgatgtggtgcgctttgatgccttcaactctccgtttagc
ccacagtcagccagctccaccctagctgcactttccaagaaagtcagtgagcggagccaa
gcctcgtcaacagccagtgctgctactgaccaccaagcctcagcaagttcctttctctca
ctcgtgtcaatgacctcctctgctgccttgctcaaagaggtggcagccagagcagctggc
aacatgctcgcagagaagaaggaagggtcccccttggtgaacgctggagtcctccaagag
gatgtgaaacccctgctggacaagaaccagaaggcacccacgccatctacacccacacag
agcctagagttgttgttgccctctactccaaaaagtagaggcaaacccaacagccaagca
ggctctcctgaggatggtggcaaaccattccagtgtcctgtgtgtggactggtcatcaaa
cgcaagagctactggaagagacacatggtcatccacacaggcttgaaaagccaccagtgt
cccctgtgtcccttccgctgtgctcgcaaagacaatcttaagtcccacatgaaggtacat
cagcaccaggaccgaggtgagacgtttcagtgcgaactttgccccttcacctcttcccgt
cacttcagcctgaagcttcacatgcgctgccaccagcacttcccccgcacagacgtcaag
gtgaaagaggagctcactaccgacacggagggcgagggttccgtgatgggtgacagcggc
tccgcagacatgagagggacggaggtgtccccgctgcactcagacaaccagcagcagacg
tcgcctccagtcgaggcttcctccaatcatgtccacatcaaggaggagccacacgagaga
gagctgtctgtgctctcccccttcagcatctgcagggaacgtcccagcagcagtgccaac
tccctggacctgcctggagttggtgtaggagtcggggtccggtccagtcctagtggtcca
accacagcctccctctttagccctgacatcactaccaaaactgccactgacctgcttatg
aagctatcagcggccaaccagagggagacgttgaaatctccattccacttgaaggaagaa
cccaaagtggaggaagcattgagccccagaccagcctcccggtcacagagccaggtccag
cccagctacccggtgacattctgccaggatgggccaacgggggccgcagctgctgcagag
cgcccagggccgctgaaaccaagggaaggaagccccccggctaagaacagcttgctgagc
caggatatcaacattaaggtggcttctgagctgctgatgaagctttcagagagcaacaaa
gatgcccagtaccagaaggtgaaagtaaaggtggagcccatggaagtggacccaccccct
gcagaactcaccccacctgcctctcacctgctggccttcagcactttaagggcgagtgag
aagagtgagccgatgacgaacctacccgagacgttgtcccgcccccagaaagacctcttc
tcccaggacatatcggtcaaaatggcctccgaacttctgttcaaactgtcagaaaaagtc
agcaaagccaacaaccacaaagacagtaacatggtgggaataaacagtccgttcctggac
gagtgcttcagacaatcaccctttaactcgcgctccaagagctgttcccccgcagaggcc
agctcctctaccagggcagcattccatgactcagaaaaagatgacgcggagctgggaaac
ggaattgcccagtggagactaagtgaacagctcttcccttgtcctgtctgtggcaaagtg
tttggtagacagcagaccctttctagacatctgtctctacacacaggatcagagttacag
ttggggtcaggcgaagaagagaggaagtacaagtgtcacctgtgtccttacgcagccaag
tgcagggctaacctcaatcagcacctgaccatccactctgtcaagctggttaacacagac
gccgaccagatcgtcagcgctgttacagccgactcagccgagcgcaagacctgcccctac
tactacagctgccatgtgtgtggtttccagacggagctgaatgcccagtttgtcggccac
atgtcgctccatgtggacaaggagcagtggatgttctcactgtgctgcaacgtctgtgac
tacgtctgcatggaggagaacgacatgaagaaccacattagtactggacatgcaggtctg
aactcaaggagtcccctcagcgagaccaagagcacctcctcgtccctctcggccctcagc
gattcactcaacagctctgagggcggagacctcacccacggtaacgaagaactcaagagc
ctgctagccctgccctcctccgcaggcagccagtccagctccggaagccactcgggatca
ggaactgaggacaagtctgacaaaggcttcgagtgtgtcttctgcaattttgtgtgcaag
acgcgtagcatgtatgagaggcacctccagatccacctcatcacacggatgtttgagtgc
gacgtctgccacaagttcctcaagacgcccgagcagctgctggagcacaagaagtgccac
accgtcccttccggagggctcaaggtttgtgaagcgctttggggcccagagcagatgaaa
ggtgctatttaa
DBGET
integrated database retrieval system
