Scomber scombrus (Atlantic mackerel): 133994862
Help
Entry
133994862 CDS
T10651
Symbol
tln1
Name
(RefSeq) talin-1 isoform X1
KO
K06271
talin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04510
Focal adhesion
ssco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133994862 (tln1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
133994862 (tln1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
133994862 (tln1)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133994862 (tln1)
Exosomal proteins of other cancer cells
133994862 (tln1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Talin_IBS2B
TLN1-like_RS
Talin_VBS2
I_LWEQ
Talin_R4
Talin_middle
VBS
FERM_f0
IRS
FERM_M
FERM_N
RA_2
ACBP
Vinculin
PH_SLA1
TrcR
DUF7783
RickCE_cat
GIT1_C
Motif
Other DBs
NCBI-GeneID:
133994862
NCBI-ProteinID:
XP_062290042
LinkDB
All DBs
Position
15:28973547..29049514
Genome browser
AA seq
2562 aa
AA seq
DB search
MVALSLKIGVGNVVKTMQFEPSTMVYDACRMIRERVPEAQLGQPNDYGLFLSDEDPKKGI
WLEAGKALDYYMLRNGDTLEYKKKQRPLKIRMLDGTVKTVMVDDSKIVSDMLMTICARIG
ITNYDEYSLVRDIGEEKKEETTGTLKRDKTLLRDDKKMEKLKQKLHTDDELNWLDHGRTL
REQGVEETEMLLLRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFDKACEFAG
YQCQIQFGDHNEAKHKPGFLDLKEFLPKEYIKNKGERKIFLAHKNCQNMTEIEAKVSYVK
LARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKESVMRVDEKTKEVIQEWNLTNIKRWA
ASPKSFTLDFGDYQDGYYSVQTTEGEQIAQLIAGYIDIILKKKKSKDHFGLEGDEESTML
EDSVSPKKSTVLQQQFNKVGRVETGSVALPAIMRSGAGGPENYQMGSMPQAKQHITSGQM
HRGHMPPLTSAQQALTGTINSSMQAVQAAQASLDEFDALPPLGTDAASQAWRKNKMDESK
HEIHSQVDAITAGTASMVNLTAGDPAETDYTAVGCAVTTISSNLTEMSKGVKLLAALMDD
EGGNGQQLLCAAKNLASAVSDMLKTAQPANTEPRQILLQAAGNVGQASGELLSHIGESDT
DPQFQFRAKGSLRVARWRVSTYCQTLDMLMQLAKAVANAAAALVLKAKNVAQKTEDSAQQ
NRVIAAATQCALSTSQLVACTRVVAPTISSPVCQEQLIEAGKLVAKSVEGCVEASQGATN
DEVLLKQVGAAATGVTQALNELLQHIKQYASGGHPIGRHGEATDRILDVTENIFSSMGDA
GEMVRQARILAQATSDLVNAIKMDAEGESDLENSRKLLSAAKLLADATAKMVEAAKGAAA
NPDSEEQQQKLREAAEGLRMATNAAAQNAIKKRLVNKLENAAKQAAAAATQTIAAAQHAA
SSNKNQAAQQQLVQSCKVVAEQIPQLVQGVRGSQSQPDSPSAQLALISASQNFLQPGAKM
VTASKATVPTISDQASAMQLSQCAKNLASALAELRTASQKAQEACGPLEIDNALSMVRGL
EKDIQEAKASAEAGKLKPLPGETLEKCSQDLGTSTKAVSSAIAQLLSEATQGNENYTGMA
ARDVAQALKSLASAARGVAATTDDPAARNAMLDCAGAVMDKSANLIEETKRAIAKPGDPE
SQQRLAQVAKAVSQALNRCVNCLPGQRDVDNAIRTVGEASKTLLADSFPSSGRSFPEVQA
HLNEVAAGLNQSANEVVQASRGTTQDLARSTSKFGQDFSNFLEAGVDMAGTSQSKEDQTQ
VVSNLKTISMSSSKLLLAAKALSTDPSSPNLKNQLAAAARAVTDSINQLITMCTQQAPGQ
KECDNALRELESVRGMLENPTEAVTDLSYFDCIDSVMENSKVLGESMAGISHNAKNSNLP
EFGDSVSGGSKALCGLTEAAAQAAYLVGVSDPNSSAGQKGLVDPAQFARANQSIQMACQN
LVDPACTQSQVLSAATIVAKHTSALCNACRLASSKTPNPVAKRQFVQSAKEVANTTANLV
KSIKALDGAFNQENREKCKAATGPLIEAVDNLTAFASNPEFASIPAQISPEGHAAMEPIV
AAAKTMLESSTGLIQTARSLAVNPKDPPKWSVLAGHSRTVSDSIKKLITNMREKAPGQRE
CDDAIEVLNGCIRDVDQASLAAISQQLTPREDISMEALHEQMAVSVHEISNLIEPVAVAA
RSEASQLGHKVSQMARYFEPLIMAAIGTASKIVSSQQQMAVLDQTKTLTESALQMLYTAK
EAGGNPKAAHMQEALEESVQMMKEAVDDLGATLAEAAGAAGAVGGMVDSINDAINKMEDS
PALEPEGTFVDYQTTMVKTAKAIAVTVQEMVTKSNTNPDDLGGLANQLTNEFGNLADEAK
YAAVTAENDEIGSHIKKQVGELGFSCTGLVTKAGALQCSPNDSFTKKELIESARKVSEKV
SHVLASLQAGNRGTQACITAASAVSGIIADLDTTIMFATAGTLNRENSETFADHREYILK
TAKALVEDTKLLVSGAGASQEKLAQAAQSSVFTITKLADVVKLGAASLGSEDPETQVVLI
NAVKDVAKALGNLISATKAAAGKPHDDPSMLQLKNSAKVMVTNVTSLLKTVKAVEDEATK
GTRALEATIEHIRQELAVFSSSDPPATTTTPEEFIRMTKGITMATAKAVAAGNSCRQEDI
IATANLSRRAIADMLHSCKQAAYHPEVSKDVQMRALRYGNECATGYLGLLEHVLVIIQKP
SHDMKQQLAGYSKRVAGSVTELIQAAEAMKGTEWVDPEDPTVIAENELLGAAAAIEAAAK
KLEQLRPRTKPKEADESLNFEEQILEAAKSIAAATSALVKAASAAQRELVAQGKVGAIPA
NAVDDGQWSQGLISAARMVAAATNNLCEAANSAVQGHASEEKLISSAKQVAASTAQLLVA
CKVKADQDSQTMKRLQAAGNAVKRASDNLVKAAQKAAFDAQDDQAVVVKSKMVGGIAQII
AAQEEMLRKERELEEARKRLAMIRQQQYKFLPTELREDGQEQ
NT seq
7689 nt
NT seq
+upstream
nt +downstream
nt
atggtggccctgtctctaaagattggtgtggggaacgtggtgaagaccatgcagtttgag
ccctccacaatggtatacgacgcctgccgtatgatcagggagagagttcctgaggcacag
cttggccagcccaatgactatgggctctttctgtctgatgaagacccaaaaaaaggtatc
tggctggaggcaggaaaggccttggactactacatgctgaggaatggggacactctggag
tacaagaagaaacagagacctctgaagatccgcatgttggatggcacagtgaagaccgta
atggtggatgactccaagattgtcagtgacatgctcatgaccatctgtgctagaataggc
attacaaactatgatgagtactcattggttcgggacattggcgaggagaagaaggaggag
accacaggcactctgaaaagagataagactctgctgagggatgacaagaagatggagaag
ctgaaacagaagctccacacagatgatgaattgaactggttggaccatggccggacactg
agagaacagggtgtggaggagacagagatgttgctgctgaggaggaagttcttctactca
gaccagaatgtggactccagagaccccgtccagctcaacctgctctatgtacaggcccgt
gatgacattctgaatggatctcatccagtctcctttgataaggcctgtgagtttgcaggc
tatcagtgtcagatccagtttggtgaccacaacgaggccaaacacaagcctggattctta
gatttaaaggagttcctgcccaaagaatacatcaaaaacaaaggagagagaaagatcttc
ctggcacacaaaaactgccagaacatgacagagatcgaggccaaagtgagctatgtaaag
ctggccaggtccctgaagacctatggagtgtcatttttcctggtcaaggagaagatgaaa
ggcaagaacaaactggtgcctcgcctgctgggtatcaccaaggagagtgtgatgagggtg
gatgagaagacgaaggaggtgatccaggagtggaacctgaccaacatcaaacgctgggct
gcctcaccaaagagcttcaccctggactttggagactaccaggatggttattactccgtg
cagaccactgaaggagagcagatagctcagctcattgccggttacatcgacatcatcctc
aagaagaaaaagagcaaagaccactttggcctagagggagatgaagaatcaaccatgctg
gaagactctgtgtcacccaaaaagtccacagtgcttcagcagcaattcaataaagtgggc
agagtggagacaggctcagtggccctgccagcaatcatgcgctcaggagccggaggtcca
gagaactaccagatgggctccatgcctcaggctaagcagcacatcaccagtggacagatg
caccgaggacacatgcctccactgacttcagcccagcaagccctgactggaaccatcaac
tccagtatgcaagctgtccaggctgcccaggcctctctggatgaatttgatgccctgcct
cctctgggaacagatgctgcatcccaagcctggcgcaaaaacaagatggatgagtccaaa
catgagatccattcccaggtggatgccatcacagcaggcactgcctccatggtcaacctc
actgcaggtgacccagcagagacagactacacagcggtgggctgtgctgttaccacgatc
tcctccaacctgactgagatgtcgaagggtgttaaactgctggcagcactcatggatgat
gaaggaggaaatgggcagcagctactgtgtgctgctaagaacctggccagtgctgtctct
gacatgttgaagactgcccagcctgcaaacacagagcctcgtcagattctgctgcaggct
gcaggaaacgtgggccaggccagcggagagctgctgtctcacatcggagagtcagacact
gatccacagttccagtttcgagctaaaggatctttaagggttgccagatggagagtctcc
acttattgtcaaacgctggacatgctgatgcagctggctaaggctgtggctaatgctgca
gcagctctggtgctcaaagctaagaacgtggcccagaagacagaggactcagcccagcag
aaccgggtcatcgctgcagccactcagtgtgctctgtccacatctcagctggtggcctgc
accagggtggtagctccaaccatcagctccccagtgtgccaggagcagctgattgaagca
ggcaagctggtggccaagtcagtggaaggctgtgtagaggcatcgcagggggccaccaat
gacgaggtcctcctgaaacaggtgggcgcggctgccactggtgtcactcaggccctcaat
gagctgcttcaacacatcaaacagtatgccagtggaggccatcctattggacgccatgga
gaggccaccgaccgcattctggatgtcactgaaaacatcttcagctcaatgggagatgct
ggtgagatggtccgtcaggctcgaattcttgcccaggccacatctgatctggtcaacgcc
atcaagatggatgcagagggagagtcagacctcgagaactcccgcaagcttttgtcagct
gccaagctgctggctgacgccactgccaagatggtggaggcagcaaagggtgcagcagca
aaccctgacagtgaggagcagcagcagaagttgcgagaggctgctgaaggtctacgcatg
gccacaaatgctgctgcccagaatgctatcaagaaacgtctggtcaacaagctggagaat
gcagccaaacaggcagcagcagcagccactcagacaatagctgcagctcagcacgctgcc
tcatccaacaagaaccaggctgcccagcagcagctcgtccagagctgcaaggtggtggca
gagcagatccctcagctggttcagggagtcagaggcagccagtctcagcctgacagtccc
agtgctcagctggccctcatcagtgccagccagaactttctgcagcctggggccaagatg
gttacagcatccaaggccacagttcccaccatcagtgaccaggcctcagctatgcagctc
agccagtgtgctaagaacctggccagtgctttggctgagcttcgcactgcctcacagaag
gctcaggaagcgtgtggtccgttggagatagacaatgctctgtcaatggtgagaggtcta
gagaaggacatccaggaggccaaggcttcagctgaggcgggcaaactcaaaccactgcca
ggagagactcttgagaaatgttcccaggatctgggtaccagcaccaaggctgtgagctca
gccatagcccagctgctgagtgaggcaactcaaggaaatgagaactacacaggtatggca
gccagagacgtggcccaggctctgaagtccctggcctcagctgccagaggagtcgctgcc
accacagatgacccagcagcacgcaatgccatgttggactgtgccggtgccgtcatggat
aagtcggccaacttgattgaagaaaccaagagagccatcgcaaagccaggagatccagag
agtcagcagaggctggcccaggtggctaaggcagtgtcccaggccctgaacagatgtgtg
aactgccttcctggtcagagggatgtggacaatgccatccgcactgtgggcgaagccagc
aagactctcctggctgactctttcccatccagtggaaggagcttcccagaggttcaggct
cacctcaacgaggtggcagccggtctgaatcagtcagccaatgaggtggtccaggcatcc
agaggaaccactcaggacctggccaggtccaccagcaaatttggacaagacttcagcaac
ttcctggaggctggtgtggacatggctggaacatcccagtctaaagaggaccagacacag
gtggtgtcaaacctgaagacaatctccatgtcatccagcaagctgctgctggcagccaaa
gccctgtccactgaccccagctcccccaacctcaagaaccagctggcagccgctgctcgg
gcagttacagacagtatcaaccagctcatcaccatgtgcactcagcaggctccaggtcag
aaggagtgtgacaatgctctcagagagcttgagtctgtaagggggatgctggagaacccg
acagaagctgttactgacctgtcctactttgactgcattgacagtgtcatggaaaactcc
aaggtccttggtgagtccatggctggtatttcccacaatgccaagaactcaaacctgcca
gagtttggtgattcagtcagtggtggctctaaagccctttgtggtctgactgaagcagct
gctcaggctgcctatttggtaggagtatcggaccccaacagttcagcaggtcaaaaaggc
ctggtggaccctgctcagtttgcccgggctaaccagtctatacagatggcttgtcagaac
ctggtggacccagcctgcacccagtcacaagtactctctgcagccaccattgttgccaaa
cacacctcagcactgtgtaacgcctgccgtctggcctcctccaaaactcccaaccctgtt
gcaaagaggcagtttgtccagtcagccaaagaggtggccaacactactgccaacctggtc
aagtccattaaggctttggatggagcctttaaccaggagaacagagagaagtgtaaggct
gctactggacctctgatagaagctgtggacaacctgacagccttcgcctccaacccagag
tttgccagcattcctgcacagatcagccctgagggtcatgcagccatggagcccatcgtg
gcggcagcaaagacaatgttggagagctcaaccggcctgatccagactgcccgctctctg
gctgtcaatcccaaagaccctcccaagtggtcagtgctggccggacactccaggactgtg
tctgactccatcaagaaactcatcaccaacatgagagaaaaggctcctggccagagagaa
tgtgatgatgctattgaggtgctgaacggctgcatccgtgacgtcgaccaggcctctttg
gctgccatcagccagcagctaacaccccgagaggacatctccatggaggctctccatgag
cagatggctgtctcagtccatgagatcagtaatctgattgagccagtagctgttgctgct
cgctctgaggcttcccagctgggtcacaaggtatctcagatggcccgttactttgaacct
ctgatcatggcagccattggcacagcgtccaagattgtcagcagtcaacagcagatggct
gtcttagaccagaccaagaccctgacagagtcagccctgcagatgctctacactgccaaa
gaggctggaggaaaccccaaggcagcacatatgcaggaggccctggaggagtcagtgcag
atgatgaaagaggcagtagatgacctgggtgccactctggctgaagctgctggtgctgct
ggtgctgtgggtggcatggtggactccatcaatgatgctatcaataaaatggaagactcg
cctgcattggaacctgaaggcacctttgttgactaccagactaccatggttaagacagca
aaggctattgctgtcactgtgcaggaaatggtgaccaaatctaacaccaaccctgatgac
ctcggaggattggccaaccagctgacaaacgagtttggaaatctagcagatgaggccaaa
tatgcagccgtgacagcagagaatgatgaaattggttctcacattaagaagcaagtgggt
gagttgggtttcagctgcacaggtctggtgaccaaagctggagccctgcagtgcagcccc
aacgactcgttcaccaagaaagagctgattgaaagcgcccgcaaagtctctgagaaggtc
tcccatgtgctggcgtccctgcaggccggtaaccgtggtacccaggcctgcatcacagca
gccagcgctgtgtctggaatcattgcagaccttgacaccaccatcatgtttgccactgct
ggtactctgaacagagagaactcagagacctttgctgaccacagagaatacatcctgaag
acagccaaggctctggtggaggacaccaagctgctggtatctggtgctggagccagtcag
gagaagctggcccaggctgcccagtcctctgtgttcaccatcaccaaactggctgatgtg
gtcaaactgggagccgccagtctgggatctgaagacccagagacccaggtggtcctaatc
aatgcagtgaaggatgtggccaaagctctgggcaaccttatcagtgccaccaaagcagct
gcaggcaaaccccatgatgaccccagcatgctgcagcttaagaactctgctaaggtgatg
gtgaccaatgtaacatcactcctgaagacggtgaaggcagtagaggatgaagccacaaag
ggaaccagagcgctggaggccactattgaacatatcagacaggagcttgctgtgttcagc
agttctgacccaccggcaacgacaaccacacccgaggagttcattcgcatgactaaagga
atcactatggcaacagcgaaagcagtggctgcgggtaattcttgtcgtcaggaagacatc
attgccacggccaacctcagcagaagggccattgctgacatgctccactcctgcaagcaa
gctgcttaccacccagaggttagcaaggacgtccagatgagagcgctgcgctatggtaat
gaatgtgctactggatatctgggactgctggagcatgtgttggtgatcatccagaagccc
tctcatgatatgaagcagcagttagccggttactctaagcgagtagcaggctctgtcact
gaactcatccaggctgctgaggccatgaaaggcacagagtgggtggaccctgaggatccc
acagtcatcgcagagaatgagctgctgggagctgcagcagctattgaagcagctgccaag
aaactggagcagctgagaccaaggaccaaacccaaggaggcagatgagagcttgaacttt
gaggagcagattctggaagcagccaagtccatcgcagctgccaccagtgctctggtcaaa
gctgcttcagcagcacagagggagctggttgctcaagggaaggtgggagcaataccagcc
aatgcagtggatgatggacagtggtctcagggactgatctcagctgctcgaatggttgcc
gcagcgaccaacaacctgtgtgaagcagccaactctgcagtccagggacacgccagcgag
gagaagctaatctcatcagccaagcaggttgcagcctccaccgctcagctgcttgtggcc
tgcaaagtcaaggctgaccaagactcccagaccatgaagaggcttcaggctgctggaaat
gctgtgaagagagcctctgataacctggtgaaagcagcacagaaagcagcgtttgatgct
caggatgaccaggctgtggttgtcaagagtaagatggttggaggtattgctcagatcatt
gctgctcaggaagagatgctgcgaaaagaaagggagctggaggaggccaggaagaggctg
gccatgatcagacagcagcagtacaagttcctccccacagagctgcgggaggacggccag
gagcagtga
DBGET
integrated database retrieval system
