Scomber scombrus (Atlantic mackerel): 133997594
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Entry
133997594 CDS
T10651
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-1-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04080
Neuroactive ligand-receptor interaction
ssco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
133997594
04082 Neuroactive ligand signaling
133997594
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssco04040
]
133997594
Ion channels [BR:
ssco04040
]
Ligand-gated channels
GABA-A
133997594
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
133997594
NCBI-ProteinID:
XP_062293236
LinkDB
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Position
17:complement(24714500..24722265)
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AA seq
396 aa
AA seq
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MRPGFGGPAVPVGVDVQVESLDAISEVDMDFTMTLYLRHYWKDERLSFRSNKNQSMTFDG
RLVKKIWVPDMFFVHSKKSFTHDTTTDNVMLRVYPDGKVLYSLRVTVTSMCSMDLSRFPL
DTQTCSLEIESYAYTDDDLMLYWKEGNRSLNTDERISLSQFLIQEFHTTTKLAFYSSTGW
YNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTI
ITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVIEYAAVNYLSTLQERKERKLRDRVSESL
QLPCTCGMSHPGTMSASYSEVDVNNTGNYGLPEENGVKRERILVQLAMESDPITGHVGSG
AYSSVLIDTHAIDKYSRVIFPGSYVLFNIIYWSIYC
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccaggatttggagggcctgcagtcccagttggagtggacgttcaggtagaaagc
ctggatgctatttcagaggttgatatggactttaccatgaccttatacctgaggcactac
tggaaagatgaacgtctgtcctttagaagcaacaagaaccagagtatgacatttgacggc
cgcctggtgaagaagatctgggtacctgacatgttttttgtccactctaagaagtccttc
acacatgacaccaccactgacaacgttatgctgcgagtctacccagatggcaaagtcctc
tacagcctcagagttacagtcacatccatgtgcagcatggacctgagtcgctttcctctt
gacacacagacatgctctttggagatagagagctatgcgtacacagatgatgacctaatg
ctgtactggaaggaagggaaccgctcattaaacacagatgaaagaatatctctctctcag
ttcctcattcaggagttccacaccaccaccaagctggcattctacagcagcacaggctgg
tacaaccgtctgtacatcaacttcactctgcggcgtcacatcttctttttcctgctgcag
acctactttcctgccacgctgatggtcatgttgtcctgggtgtccttctggattgaccga
agggccgtgcccgctagagtaccgttaggtataaccacagtgctcaccatgtctaccatc
atcactggagtcaacgcctccatgcccagggtctcctacatcaaagctgtggatatttac
ctctgggttagttttgtctttgtcttcctgtctgtgatcgagtacgctgccgtcaactac
ctgtccacactgcaagaacgcaaggagaggaaactcagagatagggtgagtgagtctttg
cagctgccgtgtacctgtggtatgtcccatcctggtacgatgtcagccagctacagtgag
gtggatgtcaacaacacagggaactacggcctgccagaagagaacggggtgaaacgggag
aggatactggtgcagctggcgatggagagcgacccgatcaccggccacgtcggctccggc
gcttacagcagcgtcttgatcgacactcacgctatagacaagtactcacgggtcatcttt
cctggatcttacgtcctcttcaacatcatctactggtcgatctactgttaa
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