Scomber scombrus (Atlantic mackerel): 133999055
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Entry
133999055 CDS
T10651
Name
(RefSeq) heat shock 70 kDa protein 1
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03040
Spliceosome
ssco04010
MAPK signaling pathway
ssco04141
Protein processing in endoplasmic reticulum
ssco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133999055
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133999055
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133999055
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133999055
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssco01009
]
133999055
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssco03041
]
133999055
03009 Ribosome biogenesis [BR:
ssco03009
]
133999055
03110 Chaperones and folding catalysts [BR:
ssco03110
]
133999055
04131 Membrane trafficking [BR:
ssco04131
]
133999055
03051 Proteasome [BR:
ssco03051
]
133999055
03029 Mitochondrial biogenesis [BR:
ssco03029
]
133999055
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
133999055
Protein phosphatases and associated proteins [BR:
ssco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
133999055
Spliceosome [BR:
ssco03041
]
Complex B
Other components
Prp19 complex
133999055
Complex C
Prp19-CDC5 complex
133999055
Ribosome biogenesis [BR:
ssco03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
133999055
Chaperones and folding catalysts [BR:
ssco03110
]
Heat shock proteins
HSP70 / DNAK
133999055
Membrane trafficking [BR:
ssco04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
133999055
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
133999055
Proteasome [BR:
ssco03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
133999055
Mitochondrial biogenesis [BR:
ssco03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
133999055
Exosome [BR:
ssco04147
]
Exosomal proteins
Proteins found in most exosomes
133999055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
EAD11
Motif
Other DBs
NCBI-GeneID:
133999055
NCBI-ProteinID:
XP_062294163
LinkDB
All DBs
Position
18:complement(2133192..2136180)
Genome browser
AA seq
639 aa
AA seq
DB search
MSAAKGVAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDSAKNQ
VALNPSNTVFDAKRLIGRKFDEPVVQADMKHWPFKVVSDGGKPKIQVEYKGEDKTFSPEE
ISSMVLVKMKEIAEAYLGNKVSNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTA
AAIAYGLDRGKSAERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRMV
NHFVEEFKRKHKKDISQNKRALRRLRTACERAKRTLSSSSQASIEIDSLFEGIDFYTSIT
RARFEELCSDLFRGTLEPVEKSLRDAKMDKGQIHDVVLVGGSTRIPKIQKLLQDFFNGRE
LNKSINPDEAVAYGAAVQAAILTGDTSGNVQDLLLLDVAPLSLGIETAGGVMTSLIKRNT
TIPTKQTQAFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGLPPAPRGVPQIEVTF
DIDANGILNVSAVDKSTGKENKITITNDKGRLSKEEIERMVQDADKYKEEDELQRDKIAA
KNSLESFAFNMKSSLQDENMKGKISEEDKKKVTEKCDETISWLENNQLADKEEYQHQQKE
LEKVCNPIISKLYQGGMPAGSCGEQARAGSQGPTIEEVD
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagctaaaggtgtagctatcggcattgacctgggcaccacctactcctgtgtg
ggggttttccagcacggaaaagtagaaatcatcgccaacgaccagggcaacaggacaacc
cccagctatgtggcgttcactgacacagagaggctgatcggggactcagccaagaaccag
gtggctttgaaccccagcaacactgtgtttgatgccaagagactgattggaagaaagttt
gatgagccagtggtgcaggcggacatgaagcactggcccttcaaggtggtcagtgatgga
gggaagcccaaaattcaagtggaatacaaaggggaagacaaaaccttttcccctgaggag
atctcctccatggtcctggtgaagatgaaggagattgctgaggcctacctcggcaacaag
gtgtctaacgcagtcatcacagtcccggcttacttcaacgactcacagcgtcaggccact
aaagacgcaggcgtcatcgcaggactgaacgtcctgaggatcatcaatgagcccacggca
gccgccatcgcgtacggtctggacagaggcaagtcagcagaacgtaacgtcctgatcttt
gacctgggcggaggcacctttgacgtgtccatcctgacaatcgatgacggtatctttgag
gtcaaagccacagctggagacactcacctgggcggagaagactttgataaccgcatggtc
aaccactttgtggaggagttcaagaggaaacacaagaaggacatcagccagaacaagaga
gccttgaggaggctgcgcacagcttgtgagagggccaagaggaccctgtcctccagctcc
caggccagcattgagattgattctctgtttgagggcatcgacttctacacctccatcacc
agggctcgctttgaggagctgtgctccgacctgttcaggggaacattagagccggtggag
aaatctctgagggacgccaaaatggacaagggacagatccacgacgtggtcctggtaggg
ggctccacccgaatccccaaaatccagaaactcctgcaggacttctttaatggcagggag
ctgaacaagagcatcaacccagatgaggcggtggcttacggtgccgccgtccaggccgcc
attctcacaggcgacacctcgggcaacgttcaggacctgctgctgctggacgtggcgcct
ctgtctctgggtattgagacagccggaggagtcatgacgtctctgattaaacgtaacacc
accatccccaccaaacaaacccaggccttcaccacctactctgacaaccagcccggagtc
ctcatccaggtctacgaaggggagcgagccatgaccaaggacaacaatctgctgggcaag
tttgagctgacaggactcccacctgccccacgaggggtcccgcagatcgaggtcaccttc
gacatcgacgccaacggcattttgaacgtgtcggcggtggacaaaagcaccggcaaagag
aacaagatcaccatcaccaacgacaagggccgactgagcaaagaagagatcgagaggatg
gtgcaggacgccgacaaatacaaagaggaggacgagcttcagagggacaaaatcgctgcc
aaaaactcgctggagtccttcgctttcaacatgaagagcagcttgcaggacgagaacatg
aagggcaaaatcagcgaggaggacaagaagaaggtgacggagaaatgtgacgagaccatc
agctggctggagaacaaccagctggctgataaagaggagtaccaacaccaacagaaagag
ctggagaaagtgtgtaaccccatcatcagcaagttgtatcagggagggatgcctgcaggc
agctgtggagagcaggcacgagccggctcccaggggcccaccatcgaggaagtggactaa
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