KEGG   Scomber scombrus (Atlantic mackerel): 134000275
Entry
134000275         CDS       T10651                                 
Name
(RefSeq) calpain-2 catalytic subunit-like
  KO
K03853  calpain-2 [EC:3.4.22.53]
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco04141  Protein processing in endoplasmic reticulum
ssco04210  Apoptosis
ssco04217  Necroptosis
ssco04218  Cellular senescence
ssco04510  Focal adhesion
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    134000275
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    134000275
   04217 Necroptosis
    134000275
   04218 Cellular senescence
    134000275
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    134000275
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ssco01002]
    134000275
Enzymes [BR:ssco01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.53  calpain-2
     134000275
Peptidases and inhibitors [BR:ssco01002]
 Cysteine peptidases
  Family C2: calpain family
   134000275
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_7 CAPN13-like_C_EFh She9_MDM33
Other DBs
NCBI-GeneID: 134000275
NCBI-ProteinID: XP_062295622
LinkDB
Position
2:complement(37054988..37091214)
AA seq 701 aa
MSGIAASLQRLREKDQGLGSSSRAVKHLDQDYEALRQLCLESSCLFQDETFEAQTSSLGF
NELGPGSYKTRGVTWQRPTELTSDPQFIVSGASRTDICQGALGDCWLLAAIASLTLNQDV
LARVVPQGQSFEDGHYAGIFHFQFWQFGEWVDVVVDDRLPVRNGELLFVHSAEGREFWSA
LLEKAYAKLNGCYEALSGGTTTEGFEDFTGGIAEIHNLDRPDPLLFHITQKALSRGSLMG
CSIDITSSADSEAVTSQKLVKGHAYSVTGAAQVEYRSNMEKLIRIRNPWGQVEWTGAWSD
ESDQWRYISDEDRERLSHRSEDGEFWMSFTDFLRHYSRLEICNLTPDALSDDSVSKWALS
KFEGSWRRGSTAGGCRNFPNSFWTNPQFVIRLDEEDDDPGDGEAGCSFVVGLIQKNRRRM
RKMGKDMHTIGFAIYEVPDEFGGQRNVHLNRNFFLRHASAARSETFINLREVCSRFVLPA
GEYLIVPSTFEPNENGDFCVRVFSEKQADFQELDDPVESRVEKIEVDEDDVDERFRGLFG
QLAGQDCEISAFELQKILNKVVTRRSDIKTSGFSMATCRNMVNLLDKDGSGKLGLLEFKV
LWTKIENFLSIYRKKDEDNSGTMSSTETRTAVEEAGFRLNNQLHQILVARYAEADLTIDF
DNFVGCLMRLETMFNTFETMDEDESGTIELNMLQWLNVSLL
NT seq 2106 nt   +upstreamnt  +downstreamnt
atgtcaggcatcgcagcctccctgcagcggctccgggagaaggatcagggtcttggctcc
agcagccgggctgtgaagcacctggaccaggactacgaggctctgcggcagctctgtctg
gagtccagctgtttgttccaggacgaaacgtttgaggctcaaacttcgtctctcggcttc
aacgagctcggacccggatcctacaagacccgaggagtcacctggcagagacccacggag
ttgacctctgaccctcagttcatcgtctctggagcctcgaggacggacatctgtcaggga
gctctgggtgactgctggctcctcgctgccatcgcctctctgaccctgaaccaggacgtc
ttggcccgggttgtcccccagggacagagctttgaggacggacactacgctggcatcttc
cacttccagttctggcagtttggtgagtgggtggacgttgtcgttgacgaccggctgcca
gtcagaaacggagagctgctattcgtccactcagcagaggggcgggagttctggagcgct
ctgctggagaaagcctacgccaagctgaacggttgctatgaggcgttgtcagggggaacg
accaccgagggctttgaggatttcaccggcggcatcgctgagatccacaacctggaccga
ccggacccgcttctgttccacatcacccagaaagctctgagccgaggctccctgatgggc
tgctccatcgacataacgagctcagcggactccgaggccgtcacctctcagaagctggtg
aaaggacacgcctactctgtgacaggtgcagctcaggtggagtatcgcagcaacatggag
aaactgatccggatccggaacccctggggacaggtggagtggaccggagcctggagcgat
gagtcggatcagtggcgttatatcagcgatgaggatcgggaacgtctgagtcatcgctca
gaggacggagagttctggatgtccttcactgacttcctgcgtcattactctcggctggag
atctgtaacctgacaccagacgctctgagtgacgactccgtctctaagtgggctctgtcc
aagtttgagggcagctggaggagaggatccaccgccggaggctgcaggaacttccccaac
tcgttctggaccaatccgcagtttgtaatccgactcgacgaggaggacgacgaccccggc
gacggcgaggcgggctgcagctttgtggtcggtctgatccagaagaaccggcgccgaatg
agaaagatgggcaaggacatgcacacgatcggcttcgccatctacgaggttcctgacgag
tttggtggtcagaggaacgttcacctcaacaggaacttcttcctgcgccacgcctccgcc
gctcgctccgaaaccttcatcaacctgcgagaggtgtgcagccgcttcgtgctgccggcc
ggagagtacctgatcgtcccgtccaccttcgaacccaacgagaacggagacttctgcgtc
cgtgtgttctctgagaagcaggccgacttccaagagctcgatgaccccgtggagtccaga
gtggagaagatcgaggtggacgaggacgacgtggacgaacgcttcagaggattattcgga
cagctggcgggacaggactgtgagatctccgccttcgagctgcagaagatcctcaacaaa
gtggtgaccagacgttctgacattaagacgagcggcttcagcatggcgacgtgccgtaac
atggtcaacctgctggacaaagatggcagcgggaaactcggactgctggagtttaaagtt
ctgtggacgaagatcgaaaacttcctgagtatttaccgtaagaaggacgaggataactcc
gggacgatgagctccacagagacgaggacggccgtagaagaagccggcttcaggctgaac
aatcagctgcatcagatcctcgttgctcgttacgctgaagcagatttaaccatcgacttc
gacaactttgtgggctgcttgatgagactggagactatgttcaacacgtttgagacgatg
gacgaagacgagtctggaaccatcgagctcaacatgctacagtggctcaacgtgtctctg
ctctga

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