Scomber scombrus (Atlantic mackerel): 134000514
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Entry
134000514 CDS
T10651
Symbol
bmp4
Name
(RefSeq) bone morphogenetic protein 4
KO
K04662
bone morphogenetic protein 4
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04060
Cytokine-cytokine receptor interaction
ssco04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
134000514 (bmp4)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
134000514 (bmp4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ssco04052
]
134000514 (bmp4)
00536 Glycosaminoglycan binding proteins [BR:
ssco00536
]
134000514 (bmp4)
Cytokines and neuropeptides [BR:
ssco04052
]
Cytokines
Transforming growth factors (RSTK binding)
134000514 (bmp4)
Glycosaminoglycan binding proteins [BR:
ssco00536
]
Heparan sulfate / Heparin
Morphogens
134000514 (bmp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
Motif
Other DBs
NCBI-GeneID:
134000514
NCBI-ProteinID:
XP_062295844
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Position
19:complement(10545739..10555353)
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AA seq
403 aa
AA seq
DB search
MIPGNRMLMVILICQVLLGESNHASLIPEEGKKKVPGLQGRSAAQSHELLRDFEATLLHM
FGLKRRPRPSRSATVPRYLLDLYRLQSGEAEEAGVHDISFEYPERSASRANTVRGFHHEE
HMERVHELDDGETKPLRFLFNLSSIPEDELLSSAELRLYRHQIDEAITDALSDDHGLHRI
NVYEVLKPPRPGQLITQLLDTRLVHHNMSRWESFDVSPAVLRWTRERLPNYGLAVEVIHL
NQTPRHQGRHVRISRSLHQEPGEDWEQLRPLLVTFGHDGKGHPLTRRTKRSPKQRGRKRN
RNCRRHALYVDFSDVGWNDWIVAPPGYQAYYCHGECPFPLADHLNSTNHAIVQTLVNSVN
NNIPKACCVPTELSAISMLYLDEHDKVVLKNYQEMVVEGCGCR
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgattcctggtaatcgaatgctgatggtcattttaatatgccaagtcctgctgggagag
agcaaccatgctagtctgatacctgaagaagggaaaaagaaagtaccaggcctgcagggt
cgttcggccgctcagagccatgaactgctgcgggacttcgaggccacgctgctgcacatg
tttggcctcaagaggcggccgcggcccagccgctcggccactgtgcctcgctacctgctg
gacctctatcggctacagtcgggggaggctgaggaggctggagtgcatgacatctctttt
gagtacccggagaggtcagccagccgagccaacactgtgaggggtttccatcatgaagag
cacatggaaagggtgcatgagctggatgatggagaaaccaagccccttcgcttcctgttc
aacctcagcagcattccagaggacgagctgctctcttctgccgaactgaggctctaccgt
catcagatagatgaggccatcactgatgccctctcagatgaccatgggcttcaccggata
aacgtgtacgaggtgttaaagcccccgcggcctgggcagctaatcacacaactcctggac
acacgacttgtgcaccacaacatgtcacgctgggagagctttgatgtcagccctgccgtg
ctgcgctggactcgtgaacgcctccccaattacgggctggctgtggaggttatacacctc
aaccagacgccgcgccaccagggccgacatgtccgcatcagccgttcactacaccaggag
cctggcgaagactgggagcagctacgtcccctcctggttacctttggccatgatgggaag
ggtcatccgctgacccgccggaccaagcgcagccccaagcaacggggccgcaagcgtaac
cgcaactgtcggcgccacgcactgtacgtagacttcagcgatgtaggctggaatgactgg
atagtggcgccccctggttaccaggcctattactgccatggggaatgcccctttcctctg
gccgatcatctgaactcaaccaaccatgccattgttcagacactggtgaactctgtgaac
aacaacattcccaaggcctgctgtgtgccaacagagctcagcgccatctccatgctctac
ctagatgaacatgacaaggtggtcctaaaaaactaccaagaaatggtagtggagggctgc
ggctgccgctaa
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