KEGG   Scomber scombrus (Atlantic mackerel): 134001111
Entry
134001111         CDS       T10651                                 
Name
(RefSeq) calpain-1 catalytic subunit-like
  KO
K01367  calpain-1 [EC:3.4.22.52]
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco04141  Protein processing in endoplasmic reticulum
ssco04210  Apoptosis
ssco04217  Necroptosis
ssco04218  Cellular senescence
ssco04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    134001111
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    134001111
   04217 Necroptosis
    134001111
   04218 Cellular senescence
    134001111
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    134001111
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ssco01002]
    134001111
Enzymes [BR:ssco01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.52  calpain-1
     134001111
Peptidases and inhibitors [BR:ssco01002]
 Cysteine peptidases
  Family C2: calpain family
   134001111
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III CAPN13-like_C_EFh EF-hand_6 EF-hand_7 EF-hand_1 Na_Ca_ex_C
Other DBs
NCBI-GeneID: 134001111
NCBI-ProteinID: XP_062296654
LinkDB
Position
19:19862521..19873147
AA seq 693 aa
MPPPGVCLNIIEARHKKDGYGSLAKPEKFLNQDFKQLQQYCLIRGVRYIDDMFPPDAKSI
GQGILSPSDLARVEWLRPAKITNDPHFVLDGVSRFDFGQGILGNCWFLASIGALTFQNEI
FQQVVPLEQTFSEEYCGLFHFRFWRFGKWMDVVIDDKLPTVNGRLIFVQSKDPNEFWPAL
VEKAYAKVCGSYKDMSAGTPAEAMMDFTGGVHMCIQLSDPPQNLLELMYRSGKSRALMSC
GTPQGETSDNTVLPNGLVQGHAYTITGVKQMMSQGKPVHLLRLWNPWGKGEWKGDWSDLS
SLWQTVSAQDREECLSVADDGEFWMTLKDFCKFYVDLDICCTSPDFLDGGSSGHWKTSVY
EGRWVAGTTAGGCTNNRDSFWTNPQYRVKVDGDNFEKDGEKNMLVSLMQKPDKRNRRLVQ
NLHIGFGIYEVTEKDKGQMGKFPASFFSTRAPVAQTKTYMNARDVMEFIMLKPGEYVIVP
STFNPNDTASFLLTILSKAETHGYENSGYPNREAEKLKQVASVEENENKKSYFRQYSDKY
EEVDAEQLQRLLNEQFLKGDLKSGGFTIDACRSMVALMDSSITGKLNGEEFVHLWNKVAS
YKEIFFRTDVSRTGTLSLNELRNAIMATGKSVADDMLNLMALRYGASSGHMTLESFISLI
LRLDCMYKIFKQLSDGKSLNLQESEWMYIYMYT
NT seq 2082 nt   +upstreamnt  +downstreamnt
atgcctcctcctggtgtgtgtctaaacatcatagaggctcgtcacaagaaagatggttat
gggagcctcgctaaacccgagaagttcctcaatcaagactttaagcagctgcaacagtac
tgtctcatccgaggagtaaggtacatagacgatatgttccccccagatgcaaagtctatc
ggccaagggatactgagcccttctgacttggcccgggtggagtggctgagaccagcgaaa
attactaatgatccacactttgtgcttgatggagtctccaggtttgactttggtcaagga
atacttggaaactgctggtttcttgcgtcgatcggagctctgacattccaaaatgagatc
ttccagcaagttgttcctcttgagcaaacgttcagtgaggagtactgtgggctgttccac
ttcaggttttggagatttgggaagtggatggatgttgtcattgatgacaagctaccaaca
gtcaatggaagacttatctttgtccaatccaaagacccaaatgaattctggcctgctttg
gtggagaaagcctatgccaaggtgtgtggttcctacaaagacatgagtgctggaactcct
gcagaggctatgatggacttcactggtggtgttcacatgtgtatccagctgtcagacccc
cctcaaaacctgttggagctgatgtacagaagtggcaaatctagagcactgatgagctgt
ggtacacctcaaggggagacatctgacaacactgtattaccaaatggattggtccaaggc
catgcctacactatcacgggtgtcaaacagatgatgagtcaagggaaaccagtacacctg
ttgcgtttgtggaacccctggggcaaaggagagtggaaaggagattggagtgatctgtca
tctttgtggcaaactgtgagtgctcaagaccgtgaagaatgcctttctgttgccgatgat
ggagagttttggatgaccctgaaagacttctgtaaattctacgtggatcttgacatctgc
tgcacgagtccggacttccttgatggaggctcctccggtcattggaagacctcagtgtat
gaaggcagatgggttgcaggaaccactgctggaggatgcacaaataacagagacagtttc
tggactaatccacagtatcgggtgaaggttgacggggacaactttgagaaagatggtgag
aaaaacatgctggtgtctctcatgcaaaagcctgacaagagaaacagacgcctggtccaa
aatctccatattggattcggtatatatgaggtgactgaaaaagacaagggacaaatgggg
aagttcccagcctctttcttcagcactcgtgcacctgtcgctcaaactaaaacctacatg
aacgcacgtgatgtgatggagttcatcatgctgaagcctggtgaatacgtgattgtgcct
tccaccttcaatcccaacgacacagcctccttcctcctgaccatcctctccaaggcagag
acccatggctatgagaattctggttaccctaaccgtgaagcagaaaagctcaaacaggtc
gcaagtgtagaggagaacgaaaataagaaatcctatttccgccagtactctgacaagtat
gaagaagtggatgctgagcagctccagagactgctaaatgaacagttcctgaaaggagac
ttgaaatctggaggtttcaccattgatgcctgtcgcagcatggttgctctgatggattca
tcaatcactggcaaactaaatggtgaggaatttgtccatctgtggaataaagttgcctca
tacaaggaaatttttttccgcacagatgtttcacgaacaggaacactgtccctgaacgag
ctgaggaatgcaatcatggctacaggaaaaagtgtcgcagatgacatgctgaatttgatg
gctctgcgctacggtgcatcctctggacacatgacactggagagcttcatcagtctgatc
cttcgcttggactgcatgtacaaaatcttcaaacagttgtctgatggaaaatctttgaat
cttcaagagtcagagtggatgtacatttacatgtacacttaa

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