KEGG   Scomber scombrus (Atlantic mackerel): 134001148
Entry
134001148         CDS       T10651                                 
Name
(RefSeq) calpain-2 catalytic subunit-like
  KO
K01367  calpain-1 [EC:3.4.22.52]
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco04141  Protein processing in endoplasmic reticulum
ssco04210  Apoptosis
ssco04217  Necroptosis
ssco04218  Cellular senescence
ssco04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    134001148
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    134001148
   04217 Necroptosis
    134001148
   04218 Cellular senescence
    134001148
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    134001148
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ssco01002]
    134001148
Enzymes [BR:ssco01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.52  calpain-1
     134001148
Peptidases and inhibitors [BR:ssco01002]
 Cysteine peptidases
  Family C2: calpain family
   134001148
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III EF-hand_6 CAPN13-like_C_EFh EF-hand_1 EF-hand_7 Defb50 Na_Ca_ex_C Peptidase_C47 HEXIM
Other DBs
NCBI-GeneID: 134001148
NCBI-ProteinID: XP_062296698
LinkDB
Position
19:19878128..19888980
AA seq 698 aa
MPTSGVCMSIINARHKKNGYGSTTNPERFLNQDFQQLKQYCAGRNVRYIDDMFPPDRRSI
GKDLLNPSQMSQVEWLRPGKMSSNPSLIVDGVSRFDFGQGIVGNCWFLASIGALTFQKHI
LGQVVPLEQNFDEEYSGIFHFRFWRFGRWVDVVIDDKLPTINGRLIFVHSNDPNEFWPAL
LEKAYAKVCGSYSDMNAGTPAEALVDFTGGVHICIELSKPPPNLWELMYRAGKSKSLMGC
GTPQGDTSANTVLPNGLVQGHAYAVTGVKQLKSRGQNVSLVRLWNPWGQGEWKGDWSDKS
PLWKTVSPEDSQIVVGDDGEFWMTMEDFCNFYSDLDICCLCPDFLDGSSSCHWKTSSYEG
RWVAGTTAGGCMNNIDSFWTNPQYRVNIDQLLNECGSKQGDKNMLVSLMQKPDKRNRRLV
QNLHIGFSVFEVNMTFIAQKGKFPASFFSTHMAVAQSKTYMNAREVMEFFTLKPGEYLIV
PSTFNANETASFIVTIVSKSETHVHENSGRHNHDHDEVEAQFSPTEIGGDDDNKREFFRQ
FSDKYEEVDAEQLQNILNEKILQGDLKSGGFTIDACRSMVALLDSSITGKLNGDEFVRLW
NKILKYKEIFFLTDVSKTGTLSLRELRNAFMATGKKASDDVLDLLALRYGASSGHITLEN
FISLILRFDCMSRVFKQLSDGMTLTLRQSEWMYISMYT
NT seq 2097 nt   +upstreamnt  +downstreamnt
atgcctacttcgggtgtatgtatgagcatcatcaatgcacgccacaagaaaaatggctat
gggtccaccaccaaccctgagagattcctcaaccaagacttccagcagctgaaacagtat
tgtgccggccgaaacgtaaggtacatcgatgatatgttccctcctgacagaaggtccatc
ggcaaggatttactgaacccttctcaaatgtctcaagtggagtggctgagaccagggaaa
atgtcttccaatccatctcttattgttgatggggtctcgaggtttgactttggtcaaggc
attgttggaaactgctggtttcttgcatctattggagctctgacattccagaagcatatc
cttgggcaagttgttcctcttgagcaaaactttgatgaggaatacagtggaatcttccac
tttaggttctggagattcggaaggtgggtggatgttgtcattgatgataagctaccaaca
atcaatggcagactaatcttcgttcactccaatgacccaaatgaattctggcctgctttg
ctggagaaagcctatgccaaggtgtgtggttcctattcagacatgaatgctggaacacct
gctgaggctttggtggacttcactggtggcgttcacatatgtatcgagctgtcaaaaccc
cctccaaacctgtgggagttgatgtacagagctggaaaatccaagtcactgatgggttgt
ggcacaccccagggggacacatctgccaacactgtattaccaaatggattggtccaaggc
catgcctacgctgtgacaggtgtcaaacagttgaaaagcagagggcaaaacgtaagcctg
gtgcgtttgtggaacccctggggccaaggcgagtggaaaggagactggagtgataagtca
cctttgtggaaaactgtgagccctgaagatagtcagatcgtagtaggtgatgacggagag
ttttggatgaccatggaagacttctgtaacttttactctgatcttgacatctgctgtctg
tgtcccgacttccttgatgggagcagctcctgccattggaagacctcctcatacgaaggc
agatgggttgcaggaaccactgctggaggatgcatgaacaacattgacagcttctggact
aacccccagtatcgagtcaacattgatcaactgctaaatgaatgtggtagcaaacagggc
gataaaaacatgctggtgtctctcatgcaaaagccagacaaaagaaacagacgcctggta
cagaatctccacattggattctctgtatttgaggtaaatatgacttttattgctcagaag
gggaagttcccagcctctttctttagcacacacatggctgtcgcccaaagtaaaacctac
atgaatgcacgtgaggtgatggagttcttcacgctgaaacctggtgaatacttgattgtg
ccatccaccttcaacgccaatgagacagcgtccttcatcgtgacaatcgtctccaagtct
gagacccatgtccatgagaattctggacgccataatcatgaccatgacgaagtggaagca
cagttctcaccaactgaaattggaggggatgatgacaataagagagagtttttccgtcaa
ttctctgacaagtatgaggaagtggatgctgagcagctccagaacattctgaatgaaaaa
atccttcaaggagacttgaaatctggaggcttcaccattgatgcctgtcgcagcatggtc
gctctgttggattcatcaatcactggcaagctgaacggtgatgaatttgttcgtctgtgg
aacaagattctcaaatacaaggaaattttcttccttactgatgtttcgaaaacagggaca
ctgtcactgcgtgagctgaggaatgcattcatggcaacaggaaagaaggccagcgatgac
gtgctggatttgttggctctgcggtacggtgcctcctctggacacataacgctggagaac
ttcatcagtctgatccttcgctttgattgcatgagcagagtgttcaagcagttgtccgat
ggaatgactttgactcttcgtcaatcagagtggatgtacatttcaatgtacacgtga

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