Scomber scombrus (Atlantic mackerel): 134002544
Help
Entry
134002544 CDS
T10651
Symbol
tgfbr1b
Name
(RefSeq) TGF-beta receptor type-1b
KO
K04674
TGF-beta receptor type-1 [EC:
2.7.11.30
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04010
MAPK signaling pathway
ssco04060
Cytokine-cytokine receptor interaction
ssco04068
FoxO signaling pathway
ssco04144
Endocytosis
ssco04218
Cellular senescence
ssco04350
TGF-beta signaling pathway
ssco04371
Apelin signaling pathway
ssco04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
134002544 (tgfbr1b)
04350 TGF-beta signaling pathway
134002544 (tgfbr1b)
04371 Apelin signaling pathway
134002544 (tgfbr1b)
04068 FoxO signaling pathway
134002544 (tgfbr1b)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
134002544 (tgfbr1b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134002544 (tgfbr1b)
09143 Cell growth and death
04218 Cellular senescence
134002544 (tgfbr1b)
09144 Cellular community - eukaryotes
04520 Adherens junction
134002544 (tgfbr1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ssco01001
]
134002544 (tgfbr1b)
Enzymes [BR:
ssco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.30 receptor protein serine/threonine kinase
134002544 (tgfbr1b)
Protein kinases [BR:
ssco01001
]
Receptor serine/threonine kinases (RSTK): TKL group
TGFBR1 family [OT]
134002544 (tgfbr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
TGF_beta_GS
Activin_recp
Pkinase_fungal
FTA2
Haspin_kinase
APH
Motif
Other DBs
NCBI-GeneID:
134002544
NCBI-ProteinID:
XP_062297880
LinkDB
All DBs
Position
20:2800904..2871992
Genome browser
AA seq
506 aa
AA seq
DB search
MDAIPCFLLVLLFGTRIQENTALQCYCERCTANSSCTTDGVCFVAIRKSGTRLTTEQRQC
VHENELIPRDRPFICAPSVKQDTGIYPMCCTTDYCNKEPDVTVLPAVSTVQPPPLGPVAL
AAVIAGPVCVLCLLLVLAFYVCHSQRGLAGGAAHHHHHHRVPNEEDPSMDHPFITVGTTL
KDLIYDMTTSGSGSGLPLLVQRTIARTIILQESIGKGRFGEVWRGKWRGEEVAVKIFSSR
EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTV
TVEGMIKLSLSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR
HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIASRCSM
GGIHEDYQLPYYDLVQSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYA
NGAARLTALRIKKTLSQLSQQEGIKM
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaataccatgctttctgctcgtcctcctgttcgggacaaggatacaagaaaac
accgccctccagtgttactgtgagcgctgcactgccaactccagctgcaccacggatggc
gtctgtttcgtcgccatccgcaagtcgggcacccggctgaccaccgagcagcgccagtgc
gtacacgaaaacgaactgatcccgcgagaccgacccttcatctgtgccccgtccgtcaaa
caggacactggcatttaccccatgtgctgcaccacagactactgcaacaaagagcccgat
gtcacagtcttgcccgcagtctctacagtccagccccctcctctgggccccgtggccctc
gcagcggtgattgccggcccagtgtgcgtgctctgcctgctgctggtcctggcgttctac
gtttgccacagtcagaggggtctagccggaggggccgcccaccatcaccaccaccaccgg
gtgcccaacgaagaagacccatccatggaccaccccttcatcactgtcggaacaacgctg
aaagacctcatctacgacatgaccacatctggttctggatcaggtttgcccctgctggtc
cagaggaccatcgcaaggaccatcatcctccaggagagtattggtaaggggcgtttcgga
gaggtgtggcgaggtaaatggcgtggtgaggaggtggccgtgaagatcttctcctcccgt
gaggagcgctcctggttccgggaggctgagatttaccagacggtgatgttgagacatgag
aacattctgggcttcatcgctgccgacaacaaagataacgggacatggactcagctgtgg
ttggtgtcagactaccatgaacacggctccctgtttgattacctgaaccgctacaccgtc
accgtggagggcatgatcaaactgtctctgtccacagccagcggcctcgcccacctccac
atggagatagtgggaacgcaaggtaagccagctatcgctcacagagacctgaagtcaaag
aacatcctggtgaagaagaacgggacctgctgcatcgccgacctgggtctcgccgtccgc
cacgactcagccaccgacaccatcgacatcgctcccaaccacagagtgggaaccaaaagg
tatatggctccagaggtgctggacgactccataaacatgaaacactttgagtctttcaag
cgagctgacatctacgccatggggctggtcttctgggagatagccagccgctgctctatg
ggaggcattcacgaggactaccagctgccctactatgacctggtccagtcagatccatca
gtagaggagatgaggaaggtggtgtgtgagcagaagcttcgacccaacattcccaaccgc
tggcagagctgtgaggcgttgagggtgatggcaaagataatgagggagtgctggtatgcc
aacggggccgcaaggctcactgcgctccgaatcaagaagaccctctctcaactcagccaa
caggagggaatcaaaatgtag
DBGET
integrated database retrieval system
