Scomber scombrus (Atlantic mackerel): 134003303
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Entry
134003303 CDS
T10651
Symbol
nploc4
Name
(RefSeq) nuclear protein localization protein 4 homolog
KO
K14015
nuclear protein localization protein 4
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
134003303 (nploc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssco03009
]
134003303 (nploc4)
Ribosome biogenesis [BR:
ssco03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
134003303 (nploc4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NPL4
zf-NPL4
UN_NPL4
Zn_ribbon_RanBP
Ubiquitin_IARS1
Motif
Other DBs
NCBI-GeneID:
134003303
NCBI-ProteinID:
XP_062298437
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Position
21:21572014..21585363
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AA seq
627 aa
AA seq
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MADNIIVRVQSPDGMKKIAATKRDTAAAFLKKVAKEFGFNSNGFSIYLNRNKTDEILSQN
KALSLLKIKHGDMLYLFPSGSSTSSGEVMDTATPHSSTSLPSISSSSSSSSTFLIPRSFS
APQVQEDEIDQYLTKQDGKIYRNKDPQLCHHGALGKCVHCVPLEPFDEDYLNHLDPPVKH
MSFHAYIRKLTGGADKGKFAALENISCRIKSGCEGHPPWPEGICTKCQPSAITLNRQKYR
HVDNIMFENHTIADRFLDFWRKTGSQRMGYLYGRYTEHKDIPLGIRAEVAAIYEPPQNAS
QNSLEMLEDPKAAAVDEIAAKLGLRKVGWIFTDLLSEDMRIGTVRYTRNNESHYLSAEEC
ITAGYFQNQQSNTCRLSRDGQFGSKFVTVVATGGPDNQVHFEGYQVSNQCMALVRDECLL
PCKDAPELGYVKESCSEQYVPDVFFKDKDKFGNDVTFLARPLPVEYLIIDITTTFPKDPQ
YTFCSKQRFPIENREIFGETQDFHSLATYLSQCTTTAFLDVVSDFHLLLFLVTNEVMPLS
DSIGLLLDAVKTSNEDLAQTWKKSEQWATIEQLCSTVGGQPSSSLGYGAMGGPSAPASSS
AMWSCVHCTFMNQPGTEHCEMCSLPRS
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggcggataacattatcgtcagggtacagtccccggatgggatgaagaaaattgctgcc
accaagagggacactgctgctgcttttttgaagaaggtggccaaagagtttggattcaat
tccaacgggttttctatttacctgaaccgcaacaagaccgacgagatcctttctcagaac
aaagccctcagcctgcttaagatcaagcatggcgacatgttgtatctgttcccttcagga
tcctcgacctcctccggggaagtaatggacacggccaccccacattcatctacgtcgcta
ccatccatctcatcctcttcatcctcctcatcgaccttcctgatccctcggtccttctca
gcaccccaggtccaagaggatgagatcgatcagtatctgaccaagcaggacggcaagatc
tacaggaacaaagatccacagctatgtcaccatggtgctctcggcaaatgcgtgcactgt
gtaccgttagagccttttgacgaagactacctgaatcacctcgacccaccagtcaagcac
atgtcattccacgcatacattcgcaagctgaccgggggagctgataaagggaagtttgca
gctctggagaacattagctgtaggatcaagtcgggctgtgaaggccaccctccctggcct
gaggggatctgcaccaagtgccagcccagcgccatcacactaaacagacagaaatacaga
cacgtggacaacatcatgtttgagaaccacaccatcgctgaccgcttcctggacttctgg
aggaagacgggcagtcagaggatgggctacttgtacggcaggtacaccgagcacaaagac
atccctctgggcatcagagccgaggtggctgccatctacgaacccccacagaacgcctct
cagaacagtctggaaatgttggaggatcccaaagctgcagctgtggatgaaattgctgcc
aaactgggcctacgcaaggtggggtggatcttcactgacctgctctccgaggacatgagg
ataggcaccgtccgctacacgagaaataatgaatcacactacctgagtgcagaggagtgc
atcacagctggttacttccagaatcagcaatcaaacacctgcagactgtctcgagacgga
cagttcggctccaaattcgtgactgtggtagcaacaggcggtccagataaccaggtgcac
tttgagggataccaggtgtccaatcagtgcatggctctggtgagagacgagtgcctactg
ccctgcaaagacgctcccgagctgggctacgttaaagagtcctgctccgagcagtacgta
ccagacgtcttcttcaaggacaaagacaaatttggaaatgacgtcacgtttctagcccga
cctcttcctgtggagtaccttattatagatataactaccacttttccaaaggacccccag
tacaccttctgctccaaacaacgcttccccattgagaatcgtgaaatctttggagagaca
caagatttccacagtttagcgacgtacctgtcccagtgcaccaccacggcattcctggac
gttgtgtcagacttccatctgctcctcttcctcgtcaccaatgaagtcatgcctctgagc
gacagcatcgggctgctactagacgcagtgaagacttctaacgaggatctggctcagacc
tggaagaagtcggagcagtgggctacaatcgagcagctgtgcagtacggttggcgggcag
ccctccagctctctgggttacggggcgatgggcggcccctctgcccccgcctcctcctca
gccatgtggtcctgcgtccactgcaccttcatgaaccagcctggcacagagcactgtgaa
atgtgcagcctgccccgtagttaa
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