KEGG   Scomber scombrus (Atlantic mackerel): 134003438
Entry
134003438         CDS       T10651                                 
Symbol
vps25
Name
(RefSeq) vacuolar protein-sorting-associated protein 25
  KO
K12189  ESCRT-II complex subunit VPS25
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    134003438 (vps25)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssco04131]
    134003438 (vps25)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssco04147]
    134003438 (vps25)
Membrane trafficking [BR:ssco04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-II complex
    134003438 (vps25)
Exosome [BR:ssco04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   134003438 (vps25)
  Exosomal proteins of colorectal cancer cells
   134003438 (vps25)
SSDB
Motif
Pfam: ESCRT-II
Other DBs
NCBI-GeneID: 134003438
NCBI-ProteinID: XP_062298627
LinkDB
Position
21:18401727..18409136
AA seq 174 aa
MSFEWPWQYNFPPFFTLQPNADTRQKQLAAWCSLALSYCRHHKLYTLDVMEAQESPVFNN
KKIARKLSMEAIQVVFEELRKKGNLEWLDKNKSRCLVMWRRPEEWGKLMYQWVSKNGMVN
SVFTLYELSNGDDTEGEEFHGLEEWMLLRSLQALQTEGKAEIITMDDGKGVKFF
NT seq 525 nt   +upstreamnt  +downstreamnt
atgagttttgagtggccctggcaatataacttccctccgttttttacactacagcccaat
gctgacacgagacagaagcagctggcagcatggtgttccctggctctgtcttactgccgc
catcacaagctctacaccctggacgtcatggaggctcaggaaagccccgtgttcaacaac
aagaagatagcacgaaaactgtcaatggaagcgattcaagttgtgtttgaggaactgagg
aaaaaagggaaccttgagtggttggacaaaaacaagtccaggtgtttagtcatgtggaga
cgaccggaggaatggggcaagttaatgtaccaatgggtctccaaaaacgggatggtcaac
tctgtgtttacactttatgaattgtcgaatggtgatgacacagaaggcgaagagttccac
ggtttagaagagtggatgctgctgcgctcgttgcaggctttacagacagaaggcaaagcg
gagatcatcaccatggacgacgggaagggcgtcaaattcttttga

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