Scomber scombrus (Atlantic mackerel): 134004308
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Entry
134004308 CDS
T10651
Symbol
ipo8
Name
(RefSeq) importin-8 isoform X1
KO
K18755
importin-8
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134004308 (ipo8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssco03019
]
134004308 (ipo8)
Messenger RNA biogenesis [BR:
ssco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
134004308 (ipo8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBN_N
TPR_IPO11
Cse1
DUF7342
Motif
Other DBs
NCBI-GeneID:
134004308
NCBI-ProteinID:
XP_062299519
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All DBs
Position
22:complement(3159845..3188278)
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AA seq
1018 aa
AA seq
DB search
MDPNRIIQALKGTIDPNLRIAAENELNQSYKIINFAPTLLQIIVSEQVEFPVRQAAAIYL
KNMVSQYWQDREPSLGEVVFPFNIHENDRQQIRDHVVEGIIRCPESIRAQLTMCLRAIIK
HDFPGRWTAIVDKIGMYLQSQNSGSWYGSLLALYQLVKTYEYRKADEREPLLAAMQIFLP
RIQQLISQLMADGTIFSVLIQKQILKIFHALVQYSLPLQLINNTVMTQWMEILRAIMDRD
VPAETLEVDEDDRPELAWWKCKKWALRIITRLFERYGSPGNVTKEYYEFADFFLKTYSVG
IQQVLLKVVDQHRQKQYVTPRVLQQSLKYLNQGLSHSLTWKQMKPHMQTICQEVIFPLMC
YKDEDEKLWQEDPYEYIRMKFNLYDDHALPSTAAQSLLCKAARKRKEVLPQMMEFCHQIL
MDPSCDPRKKDGALHCIGALAELLLKKRMYREQMELMLQNYVFPLLNSPLGYLRARSCWV
LHSFSPLRFHDELVLRNAVELVKQDLVEDQEMPVKVEAAIALQTLVSNQEQAKLYIRPYI
RPVMQELLHVVKETENDDLTNVIQKMICEYNQEVAAIAVDMTQNLAEIFTRVLQSEEYEE
NEDKTVMALGILSTIDTILTVMEDHKEITQQLEGICLQVIGLVLQKPIIGMAEFYEEILS
LAFGLTCQTISPQMWQLLGVLYEVFQHDCFDYFTDMMPLLHNYVTVDTDMLLSNPKHLEV
IYSMCKKVLTIDAGEDAECHAAKLLEVIILQCRGRGIDECIPLFVEAVLERLMRGVKSSD
LRTMCLQVAIAALYYNPALLIHTLDNMRFPHNPQPITAHFINQWMNDTEFFLGLHDRKMC
IIGLSVLMELPSRPAALEGVAAQIVPSILLLFLGLKHLYASRLINKPDLLARAGAQEEDQ
NEEIPSDEDEVNENRNAMQEQSSMPTGPGGDDEDEDEDDYWDDDGFEGTPLEEYSTPLDY
DNGEDEYQFFTAALLRIQNTDAAWYQCLTAPLSDDQKKQLQEIYSISQQRRSTAAKGQ
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggatcctaacaggataatccaggctctgaagggcactatcgaccctaatctgaggata
gcggctgagaatgaactcaatcagtcctacaagatcatcaacttcgctccgaccctgctt
cagatcatcgtgtcggagcaggtggagtttcctgttcggcaggcagcggccatctacctg
aagaacatggtgagtcagtactggcaggacagagagccgtctctgggcgaggtcgtcttt
ccttttaacatccacgagaacgaccggcagcagatcagagaccacgttgtggagggaatc
atccgctgtccagagtccatacgagcccagctgaccatgtgtctgcgagccatcatcaag
cacgacttccccggccgctggaccgccatcgtcgacaagatcggcatgtacctgcagtca
cagaacagcggcagctggtacggcagcctgcttgctctctaccagctggtcaaaacctac
gagtacaggaaggcagacgagagggagccgctgctggcagccatgcagatcttcctgccg
aggattcaacagctcatcagccagctgatggccgacggcaccatcttctctgtcctcatc
cagaaacagatcctcaagatcttccatgcacttgtacagtactcgctgcctctccagctg
atcaacaacacagtgatgactcagtggatggaaatcctccgagccataatggaccgagac
gtccctgcagagacgttggaggtggatgaggacgaccgtcccgagctggcttggtggaag
tgtaagaagtgggctctgcgtatcatcaccagactgtttgagcggtatggaagccccggt
aatgtgaccaaggagtactacgagtttgcagacttcttcctgaagacatactcagtgggg
atacagcaggtcctgctgaaggtggtggaccagcacagacaaaagcagtacgttactcct
cgagtcctgcagcagagcctcaaatacctcaaccagggcctgtcacactctctgacctgg
aaacagatgaagccacacatgcagaccatatgtcaggaggtcatcttccctctcatgtgt
tacaaagacgaggacgagaagctctggcaggaagacccatatgaatacatccgcatgaaa
ttcaacctctatgatgatcacgcccttccatccaccgctgcacagagccttctgtgtaaa
gctgcccgcaagaggaaggaggttcttcctcagatgatggagttctgccatcagatactg
atggacccctcctgtgacccccgcaagaaggacggggcgctgcactgcatcggagctctg
gctgagctgctactgaagaagcggatgtacagggagcagatggagctgatgctgcaaaac
tacgtcttccctttgctcaactcccctctgggttacctgcgagccaggtcgtgctgggtg
ctccacagcttcagcccgctgcgtttccacgacgagctggtgctgaggaacgccgtggag
ttggtcaaacaggatctggtggaagaccaagagatgcccgtcaaggtggaggccgccatc
gctctgcagacactggtcagcaaccaggaacaagccaagctgtacatcaggccgtacatc
cggccggtcatgcaggagctgctgcacgtggtcaaagagacggagaacgacgacctgacc
aacgtcatccagaagatgatctgcgagtacaaccaggaggtggcggccatcgctgtggat
atgacacagaacctggcggagatcttcacccgagtccttcagagcgaggagtacgaggag
aacgaggacaagaccgtgatggccctgggcatcctcagcaccatcgacaccatcctcacc
gtcatggaggaccacaaagagatcactcagcagctggagggcatctgtttgcaggtgatc
ggtttggtcttgcagaagcccatcataggtatggcagagttctacgaggagatcctgtcc
ctggcgttcggcctcacgtgtcagaccatctccccccagatgtggcagctgctgggcgtc
ctgtacgaggtctttcagcacgactgcttcgactacttcacagatatgatgcctcttttg
cacaattacgtaaccgtggatacagacatgctcctatccaaccctaagcacctagaggtc
atctacagcatgtgcaaaaaggtgctgaccatagacgcaggcgaggacgcagagtgtcac
gctgccaagctgttggaagtcatcatcctgcagtgtaggggccgaggcatcgacgagtgc
atccctctgttcgtggaggcggtgctggagcgtctgatgcggggggtgaagtccagcgac
ctgaggaccatgtgcctgcaggtggccatcgccgctctgtactacaacccagcgctgctc
atccacactcttgataacatgcgcttcccacacaacccgcagcccatcaccgcccacttc
atcaaccagtggatgaacgacacagagttcttcctggggctccatgaccgtaagatgtgc
atcatcggcctgagcgtgctgatggagctgcccagtcggccggcagcgctggagggagtc
gccgcccagatcgtcccctccattctgctcctcttcctgggcctcaaacatctgtacgcc
tcacgcctcatcaacaaaccagacctgctggcccgtgcaggggctcaggaagaagaccag
aacgaggagattcccagtgatgaagacgaggtgaacgagaaccgtaacgccatgcaggag
cagtccagtatgccgactggcccagggggtgacgacgaggacgaagacgaagacgactac
tgggacgacgacggctttgagggaaccccgttagaggagtacagcacacctctcgactac
gacaacggagaagacgagtatcagttcttcaccgccgccctgctcaggatccagaacact
gatgcagcctggtaccagtgtttgacggctccactcagcgacgaccagaagaaacagctg
caggagatctacagcatctcacagcagaggaggagcaccgctgccaagggccagtga
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