Scomber scombrus (Atlantic mackerel): 134006323
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Entry
134006323 CDS
T10651
Symbol
dysf
Name
(RefSeq) dysferlin
KO
K18261
dysferlin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
134006323 (dysf)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssco04147
]
134006323 (dysf)
Membrane trafficking [BR:
ssco04131
]
Endosome - Lysosome transport
Others
Ferlins
134006323 (dysf)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
134006323 (dysf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerA
FerI
Pex24p
PTEN_C2
CEP76-C2
Motif
Other DBs
NCBI-GeneID:
134006323
NCBI-ProteinID:
XP_062301392
LinkDB
All DBs
Position
23:complement(6534495..6639206)
Genome browser
AA seq
2136 aa
AA seq
DB search
MTSVIPIAASPMKRANNLRHSDPLASVIFRGSKKKTKVIKNNPNPVWNEGFEWDLKGIPL
DSGAELHCVVKDHEKMGRNRFLGETRLSLRDVLNSPNLAASFTMSLLDTKRNNTGATLTL
QVSYIPPPGSAPIFQPPPQPEVMPHNNPSVEMDTITMISLDTLGEEDTESMMMLEPTEDQ
GPDDGRSMVIVGTQGNQGQESPAAQTPKRSPPSYNTQGGLRKRRRGASSQPKPLPNKPQD
IQIRVRVIEGRQLPGINIKPVVKIAIAGQTKRTRIRKGNNPVFDETFFMNFFETPSDLFD
EPIFITVCDSRSLRTDAVIGEFKLDVGTVYSEHRHCFLRKWLLLCDSDDLSAGVKGYLKV
SLFVLAAGDEPPADRRDCVEEKEDIEGNLLRPAGLSLRGATFTMRIFRAEDLPQMDDAFM
DGMRQVFGFDSNRKNLVDPLVEIHFAGKTVCTKILEKNANPQWHQSLTMPIRFPSMCEKM
RIRILDWDRASHNDVIGTAQLCMSKISAPGGEIDDDLSPRTVQPGIDDTLGFLPTFGPCF
VNLYGSPREFTAFNDPHEALNLGKGEGVAYRGRVLMELTTKLVDKPEPKSEDIPSDDLLV
VEKFLRKRKFSLFVAFYSATLLQDVDDAIQFEVSIGNYGNKFDYTCLPLASTTQFSRAVF
DGCHYYYLPWGNVKPVVVLSSEWEDIKPRIEALNMLQAIIDRLEENLQRVQLEVKAGSDL
EEVELRVVELLEQVITDCSEELPSLDQWQCVTPLDRSLRHIRTLHLQQIIAAALALKHGP
ATDLSTVLDQAEDWANRLRSMAEEPQNSLPDIVIWMLQGDRRVAYHRIPAHTVVFSQQNC
GKHCGQLQTVLLKYPQGSGAEAKLPGQLRVKVWFGLAADVKHFNDYAEGKLSVFAETYEN
QTRLALVGNWGTTGLTYPKFSDVTGRVKLPKESFKPSPGWTWAGDWCISPEKTLLFAEDA
GHMTFSEEVFENQMRLPGGQWIGMPEGYTDVNGEKAVPKDDVECPPGWVWEEVEWSEDLN
RAVDDQGWEYGITIPPDRRPKSWVPAEKMYHTNRRRRWIRMRRRDQQKMDALRKQRPDET
EKEGWEYASLFGWKFHLKPRKTDSFRRRRWRCRMEPLEKTGPAAIFALECSLSSIEDKSD
DKSVTTTFGVNRPTISCIFERGTRYHLRCYLYQARDLLAMDKDSFSDPYAIVSFLHQSQK
TVTVRNSLNPTWDQTLIFYEVEIFGDPEVVTASPPNVVVEFYDQDTYGADEFMGRCACQP
SFISSPRLEWIPIHKGEKNAGELLAAFELIRRDKPAVHHIPGQEGDILTSSNVLDELILP
GFLSENLQEWPEESDLPYPPPQREPNVFVVPQGIKPVLQRTAIEILAWGVRNLKSFQLAT
VTSPSLQVECGGAMVQSCVIRSMKKKPNFDVNMLILDVRLPCEELYMPPIIIKVIDNRQF
GRKPVVGQCTIRSLEEFRCSLQDEGGDVEVEEGRGDLPHFSGDVLIDIDDHEPLISDQLA
DGAGSAIINLSTSSSSLHMLQWAEEFMDWWSKFYASIGEKNKCGTYLERGFDTLKVYDQE
LEKVKGFEGLSDFCQTFKLYRGRTQDEGEDPSVVGEFKGMFKIYPLPDDPSVATPPRQFR
KLPPNGIEDCLVRVYIIQAEGLQPKDTHGKCDPYVKITLGKKTINDHENYIPSTLEPVFG
KLFELNCSLPVEKDLRVMVYDHDMMTKDDKIGETVIDLENRFLSKYGAMCGLPQSYCVSG
LNQWRDQWTPRQLLSKVCERRNLRKPVYRNEVVYFRGDEYTAADLEDKHMSKRHLGSIEE
RLALHILRKLELVPEHVETRPLYSPMQPDIEQGRLMMWVDVFPKSLGPPGPPFNVTPRKA
KRFFLRCIIWNTSDVILDDVSISGEKMSDIYVKGWIDGHEHNKQKTDVHYRSMGGEGNFN
YRFLFPFHYLPAEQLCVVDRKAHFWSLDKAETKLPPKLTIQIWDNDKFSFDDYLGHLAMD
LNHMLRPAKSPEKCTLQLLEQPAEKLVSLFEQKTVKGWWPCTCNQNGEKIIAGKVEMSLE
IVTEQDQEERPAGLGRDEPNMNPHLEEPQRPETSFLWFSSPYKTLRFILWRRFKWFIILF
IILFFIFLFFGVFLYSFPNYAAMKMVGPFGPAKGTE
NT seq
6411 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcagtgattcctattgcagcgtcacctatgaagcgtgccaacaacttgagacac
tctgaccccctggctagtgtcatcttcagagggtctaagaagaagacaaaagtcatcaag
aacaatcccaaccccgtctggaatgagggttttgaatgggatcttaaggggattcctctg
gactctggagcagagctgcactgtgttgtcaaagaccatgagaagatggggaggaacagg
tttctgggtgaaacccgactgtctctcagagatgtgctcaactctccaaacctggctgcc
tccttcacaatgtccctgctggacaccaagagaaacaacacaggggccacactgaccctg
caggtttcctacatccctccaccaggatcggctccaatcttccagcctcccccccagccg
gaggtcatgccccataacaaccccagtgtggagatggacaccatcacaatgatttctctg
gacactctgggcgaggaggatacagagagtatgatgatgctggagcccacagaagaccag
ggccctgatgacggacgctccatggtgatcgtcggcacccagggaaatcagggccaggag
tcccccgctgcccagacacccaaacgatcgccaccgtcctacaacacccaaggagggctg
aggaagaggaggagaggagccagcagtcagcccaaacctctgcccaacaaaccacaggac
atccagattcgtgtgcgagtcattgagggacgacagttgcccggcatcaacatcaagcct
gttgtcaagatagcgatagcagggcagaccaagaggactcgcatcagaaaaggaaacaac
ccagtgtttgatgagacatttttcatgaacttctttgagactccgtcagacttgtttgat
gaaccaatcttcattactgtgtgtgactctcgctctctgagaacggatgctgtgatcggt
gaattcaagttggatgttggcactgtctacagtgagcacagacactgcttcttgagaaaa
tggcttctgctgtgtgactccgacgacctctctgctggagttaagggttacctaaaagtc
agcttgttcgtcttggccgctggagacgagccaccggctgataggcgtgattgtgtggag
gagaaagaggatatcgaaggaaacctgctgagaccagctggtctgtctctgagaggagcc
accttcaccatgaggattttcagagctgaagacctcccacagatggatgatgccttcatg
gatgggatgaggcaggtttttggattcgacagcaacaggaagaacttggtggatcctctg
gtggagatccactttgctggcaaaacagtctgcactaagattctggagaaaaacgccaat
ccacaatggcaccagagtctgaccatgccaattaggtttccttctatgtgtgagaagatg
aggatcagaattctggactgggacagagccagtcacaatgatgttatcggcactgcccag
ctgtgcatgtctaagatctccgctccaggtggagaaatagatgatgacttgtctccacgg
accgtccaacctggcattgatgacactcttggtttcctgccgacgttcggcccatgtttc
gtcaatctttacggcagccccagagagttcaccgccttcaatgaccctcatgaagctcta
aatctcggaaaaggtgagggtgtggcataccgaggtcgagttttaatggaactaaccaca
aaactggtggacaaaccggagccaaaatccgaagacatcccatcagatgatctgctggtg
gttgagaaatttctcaggaagaggaagttctctctcttcgtcgcgttttattcggccaca
ctcctccaggacgtcgacgacgccatccagttcgaggtcagcatcggtaactacggcaac
aagttcgactacacctgcctccctctggcgtccaccacacagttcagcagggctgtgttt
gacggttgccactactactacctcccctggggaaacgtgaagccggtggtggttctgtcg
tcagagtgggaagatatcaaaccgaggatcgaggccctcaacatgctgcaggcgatcata
gatagactggaggagaacctgcagcgggtgcagctggaagtgaaggcaggcagtgatctg
gaggaggtggagctccgagtggtcgagctgctggaacaggtcattacagactgcagcgaa
gagctgccctctctcgaccagtggcagtgcgtgacccctctggatcgctcgttgaggcac
attcgtactctgcacctgcaacagattattgcggcggcactggctctcaaacacgggccg
gccactgatctctcaacagtgctggatcaggcggaggactgggccaacaggctgagatcc
atggccgaggagccccagaacagtcttccagacatcgtgatttggatgctgcagggcgac
cgcagggtggcgtaccaccggatcccagcacacaccgtggtcttctcccagcagaactgt
gggaaacactgcggacagctgcagaccgtcttactcaagtacccgcagggcagcggtgca
gaagccaaacttcccggccagctgagggtcaaagtctggttcggattggctgctgacgtc
aaacacttcaacgactacgctgaaggaaaactgtccgtctttgctgaaacgtatgagaac
cagacccggctcgccctagtgggcaactgggggactacaggtctgacgtaccccaagttc
agcgacgtcaccggaagagtgaaattgcccaaagagagtttcaaaccttcgcccggctgg
acctgggccggggactggtgcatcagccctgagaagacactgctgtttgccgaggacgcc
ggtcacatgaccttctcagaggaagtgtttgaaaaccagatgaggttaccgggcggacag
tggatcggcatgccggagggttacactgatgtgaacggggagaaagcggtgccgaaagac
gatgtggagtgtcctcctggctgggtgtgggaggaggtggagtggagcgaagacctcaac
agagctgtggatgatcaaggctgggagtacggcatcaccatccctccggaccgccgcccc
aagtcttgggtaccagccgagaagatgtaccacaccaaccgacgaagacggtggatacgg
atgagaaggcgagaccagcagaagatggacgccctccgaaagcagcgtccagatgagacg
gagaaggagggttgggagtacgcctcgctgttcggctggaagttccacctcaagccgagg
aagacggacagcttcaggaggcgcaggtggaggtgccgcatggagccgctggagaagacg
ggaccggcggccatctttgctctggagtgctctctgagcagtatagaggacaagagcgat
gacaagtcagtcacaaccactttcggagtcaaccgaccaacgatttcttgcatctttgaa
cgtggcacacgctaccacttgcgctgctacctctaccaagccagagacctgctggccatg
gacaaagacagcttctcagacccctacgccatcgtgtccttcctccatcagtcccagaag
acggtgacggtgcgcaacagcctcaatcccacctgggaccagacgctcatcttctacgag
gtggagattttcggcgaccccgaggtggtgacggccagtccgcccaacgtcgttgtggag
ttttacgaccaggatacctacggtgcggatgagttcatgggccgctgtgcgtgccagccc
tccttcatttcttcccctcgtctggagtggatcccgattcacaaaggggagaagaacgcc
ggcgagctattggccgcattcgagctcatacgcagagataagccagcagttcaccatatt
ccaggtcaagagggagacatcttgacctcctccaatgtcctagatgagttaatacttcca
ggattcctctctgaaaacctgcaggaatggccggaggagtcggacctcccgtatccgccc
cctcagagagagcccaacgtcttcgtggttcctcagggcatcaaacctgttctgcagaga
accgccattgagatcttagcgtggggcgttcgtaacctgaagagtttccagctggccacc
gttacctctccgagcctgcaggtggagtgtggcggcgccatggtccagagctgcgtcatc
cgcagcatgaagaagaaacccaactttgacgtcaacatgctcatccttgatgtgagactt
ccctgtgaggagctctacatgccaccaatcataatcaaagtcatcgacaaccgtcagttc
gggaggaagcccgtggtcggtcagtgcaccatccgctcgctggaggagttccggtgcagc
ctgcaggacgaaggaggggatgtggaggtggaggaagggagaggtgatttgccgcacttc
agcggagatgttctgattgacatcgacgaccatgagccgctcatatctgaccagctcgca
gacggagccggttcagctatcattaacctttccacctctagttccagccttcatatgtta
cagtgggcagaagagttcatggactggtggagtaagttttacgcctcgattggagagaaa
aacaagtgcgggacgtacctggagagaggcttcgacacgctgaaggtgtatgaccaggag
ttagagaaggtcaagggctttgagggtctctccgatttctgtcaaacgttcaaactgtac
agaggaaggactcaggatgaaggagaagatccgtcagtagtgggagagttcaagggtatg
tttaagatctaccccctgccagacgacccctccgtcgccaccccgcccagacagttcaga
aagcttcctcccaacggcatcgaggactgtttggtccgagtctacatcatccaggctgaa
gggctgcagcccaaagatacacatgggaagtgtgatccatatgtgaaaatcacgttgggg
aaaaagacgatcaatgaccatgaaaactacatcccctctactctggagcccgtctttgga
aagttgttcgagttgaactgttcgctccctgtggagaaggaccttcgggtgatggtgtac
gaccacgacatgatgaccaaagacgataagatcggagagacggtcatcgacctggagaac
cgcttcctgtccaaatatggagccatgtgtggcctgccgcagtcctactgtgtatcgggg
ctaaaccagtggcgagaccagtggacacccaggcagctgctgtctaaagtgtgcgagcga
cgaaacctgcgaaagcccgtctacagaaacgaagtcgtctacttcagaggagacgaatac
accgctgcagacctcgaagacaaacacatgtccaaacgtcatcttggctcaatcgaggag
cgactggccctccacatcttgaggaaactggaactggtacccgaacatgtggagacaaga
cccctgtacagcccgatgcaacctgacatagagcagggccgtctgatgatgtgggtggac
gtgttccccaagtctctgggaccgccgggacccccgttcaacgtcacaccacgcaaggct
aagaggtttttcctgcgttgcatcatctggaacaccagtgatgtcatcctggatgacgtc
agcatcagcggggagaagatgagcgacatttatgtgaaaggctggatcgacggacacgaa
cacaacaagcagaagaccgacgtccactaccgctctatgggcggagagggaaacttcaac
tacagattcctgtttccatttcactatctacctgctgagcaactgtgtgtcgtcgacagg
aaggcacatttctggagtttggataaagccgagactaagctgcctcctaaactgaccatc
cagatctgggacaacgacaagttctcctttgacgactacctcggtcacctggcgatggac
ctgaaccacatgctgcgtccggccaagtctccggagaagtgcaccctgcagctgctggag
cagccggcggaaaaactggtgtctctgtttgaacagaagaccgtcaaaggatggtggccc
tgcacctgcaaccagaacggagagaagatcatcgctgggaaggtggagatgtctctggag
atcgtgacagaacaggatcaagaggagcgaccggccggcctcggtagagacgaacccaac
atgaaccctcacctggaggaacctcagcgtccagagacttccttcctgtggttctcctcc
ccttacaagactctcaggttcatcctgtggaggcgcttcaagtggtttatcatcctcttc
atcatcctcttcttcatcttcctcttcttcggcgtcttcctctactccttcccgaactac
gctgccatgaagatggtgggacctttcggaccagccaaaggaacagagtga
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